Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
APOEP02649 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
APOEP02649 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.34□□□□□ -1.24
APOEP02649 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
APOEP02649 AC016251.2-201ENST00000623393 3089 ntBASIC7.33□□□□□ -1.24
APOEP02649 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
APOEP02649 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.33□□□□□ -1.24
APOEP02649 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.33□□□□□ -1.24
APOEP02649 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.33□□□□□ -1.24
APOEP02649 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.33□□□□□ -1.24
APOEP02649 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 U3.48-201ENST00000363172 216 ntBASIC7.33□□□□□ -1.24
APOEP02649 RNA5SP429-201ENST00000363688 109 ntBASIC7.33□□□□□ -1.24
APOEP02649 RNA5SP355-201ENST00000365317 135 ntBASIC7.33□□□□□ -1.24
APOEP02649 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 AL139100.1-201ENST00000408001 498 ntBASIC7.33□□□□□ -1.24
APOEP02649 RN7SKP232-201ENST00000410170 290 ntBASIC7.33□□□□□ -1.24
APOEP02649 RN7SKP137-201ENST00000411074 307 ntBASIC7.33□□□□□ -1.24
APOEP02649 RNA5SP280-201ENST00000411230 115 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.33□□□□□ -1.24
APOEP02649 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.33□□□□□ -1.24
APOEP02649 CEACAMP5-201ENST00000448037 961 ntBASIC7.33□□□□□ -1.24
APOEP02649 ST13P21-201ENST00000453250 1098 ntBASIC7.33□□□□□ -1.24
APOEP02649 GAPDHP53-201ENST00000458397 924 ntBASIC7.33□□□□□ -1.24
APOEP02649 RN7SL149P-201ENST00000465197 281 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC126615.1-201ENST00000470084 630 ntBASIC7.33□□□□□ -1.24
APOEP02649 RPL23AP8-201ENST00000479812 475 ntBASIC7.33□□□□□ -1.24
APOEP02649 RN7SL518P-201ENST00000491887 280 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.33□□□□□ -1.24
APOEP02649 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.33□□□□□ -1.24
APOEP02649 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.33□□□□□ -1.24
APOEP02649 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.33□□□□□ -1.24
APOEP02649 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.33□□□□□ -1.24
APOEP02649 MIR4800-201ENST00000537353 80 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC023080.1-201ENST00000551663 931 ntBASIC7.33□□□□□ -1.24
APOEP02649 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.33□□□□□ -1.24
APOEP02649 AC091932.1-201ENST00000569381 427 ntBASIC7.33□□□□□ -1.24
APOEP02649 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.33□□□□□ -1.24
APOEP02649 Z93930.3-201ENST00000607919 749 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC012629.3-201ENST00000623397 328 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC117503.3-201ENST00000623811 601 ntBASIC7.33□□□□□ -1.24
APOEP02649 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
APOEP02649 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
APOEP02649 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
APOEP02649 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.33□□□□□ -1.24
APOEP02649 AC005839.1-201ENST00000624148 3213 ntBASIC7.33□□□□□ -1.24
APOEP02649 AC084782.1-201ENST00000564401 2465 ntBASIC7.33□□□□□ -1.24
APOEP02649 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 AC092646.2-201ENST00000431242 2095 ntBASIC7.32□□□□□ -1.24
APOEP02649 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.32□□□□□ -1.24
APOEP02649 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
APOEP02649 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.32□□□□□ -1.24
APOEP02649 TPTE2P2-201ENST00000403471 1466 ntBASIC7.32□□□□□ -1.24
APOEP02649 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
APOEP02649 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 RNA5SP442-201ENST00000365050 107 ntBASIC7.32□□□□□ -1.24
APOEP02649 MIR199B-201ENST00000384849 110 ntBASIC7.32□□□□□ -1.24
APOEP02649 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
APOEP02649 RNU1-56P-201ENST00000391303 164 ntBASIC7.32□□□□□ -1.24
APOEP02649 AL590762.1-201ENST00000391782 432 ntBASIC7.32□□□□□ -1.24
APOEP02649 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 SNRPEP5-201ENST00000425442 278 ntBASIC7.32□□□□□ -1.24
APOEP02649 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
APOEP02649 MYO5BP3-201ENST00000431872 1279 ntBASIC7.32□□□□□ -1.24
APOEP02649 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 AL604028.2-201ENST00000437848 788 ntBASIC7.32□□□□□ -1.24
APOEP02649 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 RPL36AP55-201ENST00000454114 305 ntBASIC7.32□□□□□ -1.24
APOEP02649 AC018639.1-201ENST00000492994 442 ntBASIC7.32□□□□□ -1.24
APOEP02649 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 AC253576.1-201ENST00000511645 1156 ntBASIC7.32□□□□□ -1.24
APOEP02649 DCAF13P2-201ENST00000514188 555 ntBASIC7.32□□□□□ -1.24
APOEP02649 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.32□□□□□ -1.24
APOEP02649 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 SLC25A51P2-201ENST00000535708 889 ntBASIC7.32□□□□□ -1.24
APOEP02649 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.32□□□□□ -1.24
APOEP02649 AC023827.2-201ENST00000566880 1061 ntBASIC7.32□□□□□ -1.24
APOEP02649 RN7SL131P-201ENST00000579043 256 ntBASIC7.32□□□□□ -1.24
APOEP02649 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.32□□□□□ -1.24
APOEP02649 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms