Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RPS21P1-201ENST00000434479 247 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN2BO60939 ST13P2-201ENST00000438916 1109 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 BX323845.2-201ENST00000458382 234 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 WBP1LP1-201ENST00000460451 896 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN2BO60939 AP000805.1-201ENST00000471604 784 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN2BO60939 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN2BO60939 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.57□□□□□ -1.36
SCN2BO60939 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCN2BO60939 AL031846.1-201ENST00000560933 314 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 MRPS21P9-201ENST00000571150 257 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 AC061975.3-201ENST00000583209 244 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN2BO60939 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCN2BO60939 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
SCN2BO60939 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN2BO60939 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN2BO60939 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN2BO60939 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN2BO60939 AL049869.1-201ENST00000556933 1402 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 AC063923.1-201ENST00000478982 1619 ntBASIC6.57□□□□□ -1.36
SCN2BO60939 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN2BO60939 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN2BO60939 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN2BO60939 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN2BO60939 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN2BO60939 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCN2BO60939 MAPK10-270ENST00000641102 3538 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 AC112243.1-201ENST00000623949 3851 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.56□□□□□ -1.36
SCN2BO60939 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.56□□□□□ -1.36
SCN2BO60939 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
SCN2BO60939 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.56□□□□□ -1.36
SCN2BO60939 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SCN2BO60939 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 SNORA30B-201ENST00000365319 129 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 RNA5SP427-201ENST00000365323 119 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SCN2BO60939 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.56□□□□□ -1.36
SCN2BO60939 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 FTLP17-201ENST00000432567 525 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 NDUFB4P1-201ENST00000462398 381 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 AC083806.1-201ENST00000468934 316 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.56□□□□□ -1.36
SCN2BO60939 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.56□□□□□ -1.36
SCN2BO60939 OR5M6P-201ENST00000530227 937 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AC079866.1-201ENST00000534985 1220 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 DPPA3P2-201ENST00000553589 478 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 AC090971.3-201ENST00000557871 1041 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.56□□□□□ -1.36
SCN2BO60939 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 AL589765.5-201ENST00000596133 515 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 CYCSP1-201ENST00000604815 315 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
SCN2BO60939 AL049541.2-201ENST00000626377 555 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.56□□□□□ -1.36
SCN2BO60939 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.56□□□□□ -1.36
SCN2BO60939 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SCN2BO60939 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.56□□□□□ -1.36
SCN2BO60939 AL596244.1-201ENST00000567068 3779 ntBASIC6.56□□□□□ -1.36
SCN2BO60939 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.55□□□□□ -1.36
SCN2BO60939 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SCN2BO60939 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SCN2BO60939 NEK2P4-201ENST00000425793 1329 ntBASIC6.55□□□□□ -1.36
SCN2BO60939 AL512310.3-201ENST00000547023 1335 ntBASIC6.55□□□□□ -1.36
SCN2BO60939 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms