Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL033543.1-201ENST00000623440 13454 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC017035.1-201ENST00000411999 1115 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC105052.2-201ENST00000434317 794 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AL161626.1-201ENST00000441480 490 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC135721.2-201ENST00000464237 300 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC008620.1-201ENST00000468453 592 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 CHCHD2P7-201ENST00000508008 452 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC016559.1-201ENST00000511420 199 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC016144.1-201ENST00000548175 1087 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 EEF1B2P1-201ENST00000567221 672 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AF186192.2-204ENST00000581667 524 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 MIR4470-201ENST00000583453 72 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC006116.6-201ENST00000593258 1103 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AC241377.2-202ENST00000636462 997 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AL139254.2-202ENST00000641937 1156 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 AL049869.1-201ENST00000556933 1402 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 MFSD8-256ENST00000641949 1640 ntBASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RHBDD3Q9Y3P4 CLCA3P-203ENST00000490028 2781 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 RNU1-24P-201ENST00000364285 165 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 FAM204BP-201ENST00000369171 701 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 RPL9P21-201ENST00000392269 505 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 UQCRHP1-204ENST00000424609 274 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 BRD7P6-201ENST00000431406 1860 ntBASIC6.12□□□□□ -1.43
RHBDD3Q9Y3P4 KATNBL1P2-201ENST00000433311 835 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms