Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC007342.5-201ENST00000571340 2142 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 PPIAP24-201ENST00000328558 471 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 FAM204BP-201ENST00000369171 701 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AL133270.1-201ENST00000402635 279 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AL513325.1-201ENST00000417716 1034 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC104698.1-201ENST00000435671 276 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC005099.1-201ENST00000442083 610 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 RN7SL329P-201ENST00000467740 299 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 RPS14P7-201ENST00000473701 448 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC026898.1-201ENST00000586404 571 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 RN7SL787P-201ENST00000613000 284 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 AC245505.2-201ENST00000553572 3055 ntBASIC6.43□□□□□ -1.38
CHD8Q9HCK8 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD8Q9HCK8 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 DDX43P1-201ENST00000510713 1763 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 MIR141-201ENST00000384975 95 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC016908.1-201ENST00000442571 1219 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 RPSAP39-201ENST00000467439 883 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 RPL23AP8-201ENST00000479812 475 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 MIR4701-201ENST00000583094 63 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC016251.1-201ENST00000624299 4198 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 MAPK10-343ENST00000641677 2546 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 RPS3AP2-201ENST00000407190 754 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC002127.1-201ENST00000421305 225 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AL355433.1-201ENST00000422804 300 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC093270.2-201ENST00000486157 792 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 OR5H7P-201ENST00000514084 930 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC015801.1-201ENST00000585651 153 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 SPATA31D5P-201ENST00000376459 4784 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD8Q9HCK8 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms