Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 AL022238.3-201ENST00000609279 443 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 AC006335.3-201ENST00000613408 292 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AC129908.1-201ENST00000624553 648 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AC241377.2-202ENST00000636462 997 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 FGL2-202ENST00000637771 989 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 AC073365.1-203ENST00000641055 1992 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX3Q99909 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SSX3Q99909 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX3Q99909 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 AL357556.1-201ENST00000421884 1388 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 AC087045.3-201ENST00000623046 2468 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
SSX3Q99909 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSX3Q99909 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSX3Q99909 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.06□□□□□ -1.44
SSX3Q99909 CDC42P2-201ENST00000448566 569 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.06□□□□□ -1.44
SSX3Q99909 OR7E62P-201ENST00000456741 477 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 AC005550.2-201ENST00000476382 318 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 SNORA81.2-201ENST00000516868 170 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 AL356800.1-201ENST00000553339 735 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 AC013283.1-201ENST00000557282 492 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 STX8-209ENST00000574431 731 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 RN7SL697P-201ENST00000582484 299 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 AC108451.2-201ENST00000603875 538 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 CUX2P1-201ENST00000606426 298 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX3Q99909 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 HDAC1P1-201ENST00000455482 1445 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SSX3Q99909 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 SOCS5P5-201ENST00000402732 1586 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 CDY10P-201ENST00000452415 1567 ntBASIC6.06□□□□□ -1.44
SSX3Q99909 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX3Q99909 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX3Q99909 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 AC093297.3-201ENST00000607056 2517 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSX3Q99909 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX3Q99909 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSX3Q99909 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SSX3Q99909 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSX3Q99909 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX3Q99909 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX3Q99909 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSX3Q99909 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSX3Q99909 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX3Q99909 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX3Q99909 AC231533.2-201ENST00000419045 978 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX3Q99909 MYO5BP3-201ENST00000431872 1279 ntBASIC6.05□□□□□ -1.44
SSX3Q99909 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms