Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SHKBP1Q8TBC3 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.02□□□□□ -1.12
SHKBP1Q8TBC3 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
SHKBP1Q8TBC3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.02□□□□□ -1.12
SHKBP1Q8TBC3 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC245505.2-201ENST00000553572 3055 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 XKRY2-202ENST00000623874 1581 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 XKRY-202ENST00000624960 1581 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC018992.1-201ENST00000523778 2149 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 RNA5SP442-201ENST00000365050 107 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC092570.3-201ENST00000420113 693 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 NANOGP5-201ENST00000424456 877 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC092646.1-201ENST00000427142 901 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 MTND2P19-201ENST00000449129 1012 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 RN7SL55P-201ENST00000464534 297 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 MTND4LP3-201ENST00000468320 276 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC008620.1-201ENST00000468453 592 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC126121.1-201ENST00000482313 553 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 NDUFS5P2-201ENST00000484004 306 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC090835.1-201ENST00000515189 1024 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 ZDHHC20P3-201ENST00000531576 336 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 RFPL1S-203ENST00000539579 330 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC006967.3-201ENST00000594086 1093 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC020915.5-201ENST00000596836 964 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC124856.1-201ENST00000600819 896 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AL353621.2-201ENST00000605340 133 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC112503.1-201ENST00000608436 391 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AL669942.2-201ENST00000620352 697 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC127071.2-201ENST00000623293 527 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AL606490.2-201ENST00000457562 1330 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 PSMC1P7-201ENST00000495689 1315 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 AC104446.1-201ENST00000613728 1321 ntBASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SHKBP1Q8TBC3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SHKBP1Q8TBC3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SHKBP1Q8TBC3 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SHKBP1Q8TBC3 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SHKBP1Q8TBC3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SHKBP1Q8TBC3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.01□□□□□ -1.13
SHKBP1Q8TBC3 CASC19-248ENST00000641674 1356 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms