Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC023310.4-201ENST00000613130 650 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.77□□□□□ -1.48
CCDC71LQ8N9Z2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
CCDC71LQ8N9Z2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC125232.1-201ENST00000452554 1408 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 EEF1A1P2-201ENST00000553854 1447 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 MAPK10-287ENST00000641217 3037 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 RNA5SP260-201ENST00000363849 111 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 OR7E117P-201ENST00000422682 1112 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 FAF2P1-201ENST00000429974 1298 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 GTF2F2P2-201ENST00000445825 721 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC114755.1-201ENST00000453101 868 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 OR7E62P-201ENST00000456741 477 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 SNORA81.1-201ENST00000458922 177 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC074386.1-206ENST00000487102 761 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 SCARNA20.3-201ENST00000516913 131 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC090539.2-201ENST00000523425 671 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 CCDC58P5-201ENST00000536923 432 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL355076.3-201ENST00000555838 587 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 CYP4A26P-201ENST00000563017 196 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC096708.2-201ENST00000577676 512 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 MIR3689F-201ENST00000579617 66 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 OOSP1P2-201ENST00000579644 351 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 OR1N1-202ENST00000619659 939 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 MAPK10-357ENST00000641831 2858 ntBASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC71LQ8N9Z2 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71LQ8N9Z2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms