Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC091544.5-201ENST00000620192 3815 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 MIR6823-201ENST00000622118 61 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 AC017037.4-201ENST00000624526 826 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AL139254.2-202ENST00000641937 1156 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC217777.1-201ENST00000570034 1471 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 AL117339.4-201ENST00000608335 7063 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 AC009948.5-201ENST00000624360 4406 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE3AQ05086 ETF1P1-206ENST00000427296 984 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.53□□□□□ -1.2
UBE3AQ05086 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE3AQ05086 AC117395.2-201ENST00000463122 1128 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 PGAM4P2-201ENST00000512491 721 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 RNA5SP287-201ENST00000516358 103 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE3AQ05086 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE3AQ05086 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE3AQ05086 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE3AQ05086 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.53□□□□□ -1.2
UBE3AQ05086 AC092701.1-201ENST00000623627 1551 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.53□□□□□ -1.2
UBE3AQ05086 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.53□□□□□ -1.2
UBE3AQ05086 HSPA8P11-201ENST00000508840 1898 ntBASIC7.53□□□□□ -1.2
UBE3AQ05086 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
UBE3AQ05086 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.53□□□□□ -1.2
UBE3AQ05086 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
UBE3AQ05086 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
UBE3AQ05086 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.52□□□□□ -1.2
UBE3AQ05086 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
UBE3AQ05086 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.2
UBE3AQ05086 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
UBE3AQ05086 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.52□□□□□ -1.2
UBE3AQ05086 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC009166.2-201ENST00000624410 2833 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms