Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.44□□□□□ -1.22
NEK3P51956 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.44□□□□□ -1.22
NEK3P51956 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEK3P51956 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.44□□□□□ -1.22
NEK3P51956 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.44□□□□□ -1.22
NEK3P51956 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NEK3P51956 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 AL136298.2-201ENST00000556497 1570 ntBASIC7.43□□□□□ -1.22
NEK3P51956 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NEK3P51956 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 AL390728.3-201ENST00000452704 270 ntBASIC7.43□□□□□ -1.22
NEK3P51956 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.43□□□□□ -1.22
NEK3P51956 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.43□□□□□ -1.22
NEK3P51956 AC104849.1-201ENST00000462623 405 ntBASIC7.43□□□□□ -1.22
NEK3P51956 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 AC026336.1-201ENST00000466577 351 ntBASIC7.43□□□□□ -1.22
NEK3P51956 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.43□□□□□ -1.22
NEK3P51956 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.43□□□□□ -1.22
NEK3P51956 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 IGKV1D-32-201ENST00000517449 318 ntBASIC7.43□□□□□ -1.22
NEK3P51956 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.43□□□□□ -1.22
NEK3P51956 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NEK3P51956 AC068790.1-201ENST00000536166 355 ntBASIC7.43□□□□□ -1.22
NEK3P51956 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 OOSP1P2-201ENST00000579644 351 ntBASIC7.43□□□□□ -1.22
NEK3P51956 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 AC009955.2-201ENST00000597288 542 ntBASIC7.43□□□□□ -1.22
NEK3P51956 AP001554.1-201ENST00000604533 376 ntBASIC7.43□□□□□ -1.22
NEK3P51956 AL353807.4-201ENST00000604995 257 ntBASIC7.43□□□□□ -1.22
NEK3P51956 AC012640.3-201ENST00000607847 430 ntBASIC7.43□□□□□ -1.22
NEK3P51956 uc_338.37-201ENST00000620113 186 ntBASIC7.43□□□□□ -1.22
NEK3P51956 AC103564.3-201ENST00000621194 220 ntBASIC7.43□□□□□ -1.22
NEK3P51956 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.43□□□□□ -1.22
NEK3P51956 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEK3P51956 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
NEK3P51956 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.42□□□□□ -1.22
NEK3P51956 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.42□□□□□ -1.22
NEK3P51956 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.42□□□□□ -1.22
NEK3P51956 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NEK3P51956 AC090114.1-201ENST00000393266 448 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AL117344.1-201ENST00000407196 616 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.42□□□□□ -1.22
NEK3P51956 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.42□□□□□ -1.22
NEK3P51956 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.42□□□□□ -1.22
NEK3P51956 TRIM60P13-201ENST00000432350 1283 ntBASIC7.42□□□□□ -1.22
NEK3P51956 RPL5P27-201ENST00000437011 881 ntBASIC7.42□□□□□ -1.22
NEK3P51956 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.42□□□□□ -1.22
NEK3P51956 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.42□□□□□ -1.22
NEK3P51956 MTND3P4-201ENST00000453537 303 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.42□□□□□ -1.22
NEK3P51956 RPL31P53-201ENST00000457065 348 ntBASIC7.42□□□□□ -1.22
NEK3P51956 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.42□□□□□ -1.22
NEK3P51956 RN7SL325P-201ENST00000460434 283 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC084878.1-201ENST00000480555 648 ntBASIC7.42□□□□□ -1.22
NEK3P51956 ATG10-AS1-201ENST00000504846 648 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC008496.1-201ENST00000509131 295 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC7.42□□□□□ -1.22
NEK3P51956 OR4C1P-201ENST00000530880 937 ntBASIC7.42□□□□□ -1.22
NEK3P51956 NF1P12-201ENST00000549593 583 ntBASIC7.42□□□□□ -1.22
NEK3P51956 MTND2P17-201ENST00000550281 688 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.42□□□□□ -1.22
NEK3P51956 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 RN7SL42P-201ENST00000579786 294 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC061975.3-201ENST00000583209 244 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC005070.2-201ENST00000604391 260 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms