Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL590032.1-201ENST00000604920 252 ntBASIC9.64□□□□□ -0.87
CPS1P31327 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC9.64□□□□□ -0.87
CPS1P31327 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC9.64□□□□□ -0.87
CPS1P31327 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC9.64□□□□□ -0.87
CPS1P31327 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CPS1P31327 AL121949.2-201ENST00000403446 1548 ntBASIC9.64□□□□□ -0.87
CPS1P31327 ZNF806-201ENST00000438300 1774 ntBASIC9.64□□□□□ -0.87
CPS1P31327 DLEU2L-201ENST00000371086 3555 ntBASIC9.64□□□□□ -0.87
CPS1P31327 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CPS1P31327 AC004491.1-201ENST00000623029 1882 ntBASIC9.64□□□□□ -0.87
CPS1P31327 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CPS1P31327 AC129502.1-201ENST00000623261 1654 ntBASIC9.64□□□□□ -0.87
CPS1P31327 AC074141.1-201ENST00000588129 2995 ntBASIC9.64□□□□□ -0.87
CPS1P31327 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 AC084782.1-201ENST00000564401 2465 ntBASIC9.63□□□□□ -0.87
CPS1P31327 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.63□□□□□ -0.87
CPS1P31327 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 AC079949.2-201ENST00000617117 2933 ntBASIC9.63□□□□□ -0.87
CPS1P31327 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 SNORA58B-201ENST00000364259 136 ntBASIC9.63□□□□□ -0.87
CPS1P31327 RNA5SP284-201ENST00000384547 118 ntBASIC9.63□□□□□ -0.87
CPS1P31327 RNA5SP178-201ENST00000410380 128 ntBASIC9.63□□□□□ -0.87
CPS1P31327 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 NIPA2P1-201ENST00000426223 976 ntBASIC9.63□□□□□ -0.87
CPS1P31327 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC9.63□□□□□ -0.87
CPS1P31327 HLA-DPA3-207ENST00000454398 229 ntBASIC9.63□□□□□ -0.87
CPS1P31327 MEF2AP1-201ENST00000454867 863 ntBASIC9.63□□□□□ -0.87
CPS1P31327 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 RN7SL273P-201ENST00000481561 299 ntBASIC9.63□□□□□ -0.87
CPS1P31327 AC146944.3-201ENST00000509969 371 ntBASIC9.63□□□□□ -0.87
CPS1P31327 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC9.63□□□□□ -0.87
CPS1P31327 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC9.63□□□□□ -0.87
CPS1P31327 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CPS1P31327 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 LINC00556-201ENST00000569603 412 ntBASIC9.63□□□□□ -0.87
CPS1P31327 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC9.63□□□□□ -0.87
CPS1P31327 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC9.63□□□□□ -0.87
CPS1P31327 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CPS1P31327 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CPS1P31327 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CPS1P31327 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC9.63□□□□□ -0.87
CPS1P31327 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC9.63□□□□□ -0.87
CPS1P31327 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 AC078880.4-201ENST00000617627 1749 ntBASIC9.63□□□□□ -0.87
CPS1P31327 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 LPAL2-203ENST00000454031 2498 ntBASIC9.63□□□□□ -0.87
CPS1P31327 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
CPS1P31327 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CPS1P31327 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
CPS1P31327 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 AC020658.2-201ENST00000559030 4020 ntBASIC9.62□□□□□ -0.87
CPS1P31327 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.62□□□□□ -0.87
CPS1P31327 RN7SKP62-201ENST00000384539 329 ntBASIC9.62□□□□□ -0.87
CPS1P31327 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC9.62□□□□□ -0.87
CPS1P31327 RPL31P15-201ENST00000449770 338 ntBASIC9.62□□□□□ -0.87
CPS1P31327 AC096743.1-201ENST00000485172 319 ntBASIC9.62□□□□□ -0.87
CPS1P31327 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC9.62□□□□□ -0.87
CPS1P31327 IGKV3D-25-201ENST00000519599 235 ntBASIC9.62□□□□□ -0.87
CPS1P31327 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC9.62□□□□□ -0.87
CPS1P31327 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC9.62□□□□□ -0.87
CPS1P31327 AC008507.3-201ENST00000585753 472 ntBASIC9.62□□□□□ -0.87
CPS1P31327 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC9.62□□□□□ -0.87
CPS1P31327 MIR6719-201ENST00000622428 87 ntBASIC9.62□□□□□ -0.87
CPS1P31327 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC9.62□□□□□ -0.87
CPS1P31327 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CPS1P31327 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 TRIM51HP-202ENST00000530412 1823 ntBASIC9.62□□□□□ -0.87
CPS1P31327 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
CPS1P31327 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CPS1P31327 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CPS1P31327 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CPS1P31327 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CPS1P31327 TINAG-202ENST00000370864 692 ntTSL 2 BASIC9.61□□□□□ -0.87
CPS1P31327 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CPS1P31327 AC002127.1-201ENST00000421305 225 ntBASIC9.61□□□□□ -0.87
CPS1P31327 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms