Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CD40P25942 MFSD8-220ENST00000641243 1422 ntBASIC6.63□□□□□ -1.35
CD40P25942 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 MAPK10-290ENST00000641237 2826 ntBASIC6.63□□□□□ -1.35
CD40P25942 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 MFSD8-227ENST00000641393 4069 ntBASIC6.62□□□□□ -1.35
CD40P25942 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 ZNF812P-201ENST00000457674 1694 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC130464.1-201ENST00000416201 1500 ntBASIC6.62□□□□□ -1.35
CD40P25942 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CD40P25942 SNORD15A-201ENST00000384214 148 ntBASIC6.62□□□□□ -1.35
CD40P25942 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 AP002784.2-201ENST00000397300 549 ntBASIC6.62□□□□□ -1.35
CD40P25942 MTND4P13-201ENST00000402078 1023 ntBASIC6.62□□□□□ -1.35
CD40P25942 MTCO2P31-201ENST00000402702 684 ntBASIC6.62□□□□□ -1.35
CD40P25942 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 AC092691.2-201ENST00000461787 803 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC007547.2-201ENST00000468802 360 ntBASIC6.62□□□□□ -1.35
CD40P25942 RPS14P7-201ENST00000473701 448 ntBASIC6.62□□□□□ -1.35
CD40P25942 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 MTND4LP2-201ENST00000502312 285 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC233724.1-201ENST00000503894 233 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 BTF3P1-201ENST00000522014 495 ntBASIC6.62□□□□□ -1.35
CD40P25942 OR10V3P-201ENST00000525712 725 ntBASIC6.62□□□□□ -1.35
CD40P25942 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 MRPS36P5-201ENST00000551909 298 ntBASIC6.62□□□□□ -1.35
CD40P25942 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.62□□□□□ -1.35
CD40P25942 DUXAP3-201ENST00000603616 594 ntBASIC6.62□□□□□ -1.35
CD40P25942 RPS28P1-201ENST00000604589 187 ntBASIC6.62□□□□□ -1.35
CD40P25942 AC025171.4-201ENST00000607250 1047 ntBASIC6.62□□□□□ -1.35
CD40P25942 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 AC135050.6-202ENST00000613584 392 ntBASIC6.62□□□□□ -1.35
CD40P25942 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 AP002791.1-201ENST00000623291 381 ntBASIC6.62□□□□□ -1.35
CD40P25942 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.62□□□□□ -1.35
CD40P25942 AL162171.3-201ENST00000617439 3178 ntBASIC6.62□□□□□ -1.35
CD40P25942 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 AC011815.2-201ENST00000618230 2021 ntBASIC6.62□□□□□ -1.35
CD40P25942 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.62□□□□□ -1.35
CD40P25942 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD40P25942 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC6.62□□□□□ -1.35
CD40P25942 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CD40P25942 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.61□□□□□ -1.35
CD40P25942 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AL161891.1-201ENST00000621575 4636 ntBASIC6.61□□□□□ -1.35
CD40P25942 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms