Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AP003115.1-201ENST00000569849 463 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC6.93□□□□□ -1.3
CHD7Q9P2D1 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CHD7Q9P2D1 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AL451064.2-201ENST00000623514 1654 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 MFSD8-217ENST00000641178 4374 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AL354890.1-201ENST00000413730 346 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 RN7SL369P-201ENST00000477138 299 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC007225.2-201ENST00000562529 256 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 RNU1-150P-201ENST00000362491 162 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 RN7SKP293-201ENST00000411389 296 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 NANOGP4-201ENST00000427230 913 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 RN7SL727P-201ENST00000482164 296 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AC008055.1-201ENST00000547032 609 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 SDR42E1P1-201ENST00000611327 477 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 AL049767.1-202ENST00000637826 242 ntBASIC6.92□□□□□ -1.3
CHD7Q9P2D1 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHD7Q9P2D1 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 MED28P4-201ENST00000433137 572 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 CFL1P4-201ENST00000451536 498 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AL513218.1-201ENST00000606527 391 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 Z83820.1-201ENST00000456978 1499 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 FLJ42393-201ENST00000623801 2270 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 PSG10P-201ENST00000501199 1500 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AP000892.3-201ENST00000624094 5326 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 OR51A10P-201ENST00000307165 937 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AC130360.1-201ENST00000425489 1117 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 SNX18P26-201ENST00000458433 740 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 RPSAP39-201ENST00000467439 883 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 MTND6P16-201ENST00000504006 520 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms