Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC138866.1-201ENST00000514522 497 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 NPM1P6-201ENST00000521088 871 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL139174.1-201ENST00000531489 886 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 OR4N3P-201ENST00000559395 818 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC022662.1-201ENST00000580252 331 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL246P-201ENST00000584467 296 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 EIF4A2P1-201ENST00000587313 1063 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 SNRPCP20-201ENST00000588011 210 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL796P-201ENST00000613991 291 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL136038.5-201ENST00000620835 554 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC135068.4-201ENST00000622949 925 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC016542.3-201ENST00000623520 619 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC008432.1-201ENST00000615912 1320 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC011477.1-204ENST00000623416 1325 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AL139806.1-201ENST00000403057 1002 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AL645937.5-202ENST00000415595 944 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC012498.1-201ENST00000424037 437 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ZDHHC20P2-201ENST00000424108 429 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 KCTD9P1-201ENST00000430462 1167 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FGF7P5-201ENST00000441829 291 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC068135.1-201ENST00000446164 246 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC242426.2-201ENST00000446956 795 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 MTND1P18-201ENST00000448191 573 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC008280.2-201ENST00000455473 307 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 RPL12P7-201ENST00000493832 494 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FABP5P6-201ENST00000510588 409 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ATP6V1G1P2-201ENST00000522436 346 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 EIF5A2P1-201ENST00000564027 460 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 FRG2JP-201ENST00000568299 832 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 MIR3671-201ENST00000580455 88 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AC015802.2-201ENST00000589690 189 ntBASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CUEDC1Q9NWM3 AF146191.1-201ENST00000604941 889 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms