Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 AL161729.2-201ENST00000605700 456 ntBASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 AC104985.3-201ENST00000623479 597 ntBASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 AC139713.2-210ENST00000641741 992 ntBASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 API5P1-201ENST00000424316 1510 ntBASIC8.7□□□□□ -1.02
TRAIPQ9BWF2 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RNA5SP483-201ENST00000363431 118 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RNU6-236P-201ENST00000363886 106 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RNU4-7P-201ENST00000364758 141 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 LSM5-202ENST00000409292 538 ntTSL 2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 MTND4P3-201ENST00000417829 541 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RPS4XP16-201ENST00000427198 791 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 ARL2BPP7-201ENST00000446421 490 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 CALM1P2-201ENST00000452941 448 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 GTF2IP12-201ENST00000456547 356 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RN7SL338P-201ENST00000481467 293 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 IGLV10-67-201ENST00000519446 325 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 HIGD1AP18-201ENST00000520730 278 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC104417.1-201ENST00000523974 751 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 OR4F28P-201ENST00000559128 938 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RN7SL622P-201ENST00000585292 275 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AP001357.1-201ENST00000586304 1053 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 RPL23AP77-201ENST00000588044 463 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 OR4F8P-201ENST00000589943 937 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC022239.4-201ENST00000602626 504 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AL137190.1-201ENST00000603288 282 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AL049844.2-201ENST00000604280 628 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AL109918.2-201ENST00000605188 279 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 Z99289.3-201ENST00000605586 594 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 TUG1_3.1-201ENST00000616187 237 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC068234.2-201ENST00000619646 522 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AC026336.5-201ENST00000624455 738 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 AP000641.1-201ENST00000531988 1639 ntBASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.69□□□□□ -1.02
TRAIPQ9BWF2 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.68□□□□□ -1.02
TRAIPQ9BWF2 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms