Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 CRADD-210ENST00000552033 622 ntTSL 3 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC015801.1-201ENST00000585651 153 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC090241.1-201ENST00000587732 621 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC068802.1-201ENST00000603420 732 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC034111.1-201ENST00000562143 3770 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 MFSD8-217ENST00000641178 4374 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 U3.14-201ENST00000365363 227 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AL139135.1-201ENST00000412675 209 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC134879.1-201ENST00000426062 394 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AL512637.1-201ENST00000439523 1231 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 MTCO1P55-201ENST00000489829 745 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 RNA5SP75-201ENST00000516841 111 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 NF1P10-201ENST00000613227 742 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHMP4CQ96CF2 AC068733.2-201ENST00000605434 1418 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 BX322650.1-201ENST00000332359 2143 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC023886.2-201ENST00000321285 411 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 SNORA70.8-201ENST00000384231 136 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC024937.2-201ENST00000411669 1242 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 EIF4A1P13-201ENST00000415667 230 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 VN1R3-201ENST00000418822 919 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AL354983.1-201ENST00000434580 906 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 OR7L1P-201ENST00000456181 380 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC008868.1-201ENST00000509786 737 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 IGLV1-62-201ENST00000518003 441 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms