Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 RNA5SP65-201ENST00000363166 119 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC113608.1-201ENST00000398740 305 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SKP254-201ENST00000410685 310 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 MED15P8-201ENST00000411601 545 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC231533.2-201ENST00000419045 978 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 GAPDHP55-201ENST00000423136 803 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SL587P-201ENST00000459853 281 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC117395.1-201ENST00000487390 403 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AF186996.3-201ENST00000509527 964 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 EEF1B2P1-201ENST00000567221 672 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SL199P-201ENST00000578752 281 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SL656P-201ENST00000579044 281 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SL404P-201ENST00000582421 281 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC090699.1-201ENST00000586264 321 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 ACTG1P22-201ENST00000603793 1099 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 SNX18P3-202ENST00000565670 1750 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 AC110597.1-201ENST00000562669 3176 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 PARP4P1-201ENST00000435945 2337 ntBASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC71LQ8N9Z2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AP002370.1-201ENST00000528055 1602 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 SNORA70.8-201ENST00000384231 136 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 RNA5SP18-201ENST00000390935 121 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 NPM1P30-201ENST00000425092 828 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AL451136.1-201ENST00000435399 325 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AL591438.2-201ENST00000452635 691 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 RPS18P13-201ENST00000461260 454 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SL368P-201ENST00000473384 277 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 RN7SL549P-201ENST00000478997 282 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC026254.1-201ENST00000479473 431 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC008040.4-201ENST00000494834 768 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 H3F3AP3-201ENST00000497682 407 ntBASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71LQ8N9Z2 IGLV10-67-201ENST00000519446 325 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms