Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX6-1P78426 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX6-1P78426 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX6-1P78426 RNU1-16P-201ENST00000365477 164 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 RNU6-650P-201ENST00000365658 111 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
NKX6-1P78426 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 SSX9-201ENST00000376909 591 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 SNORA10B-201ENST00000384458 133 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 MIR138-2-201ENST00000384916 84 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 RNA5SP35-201ENST00000391257 129 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.66□□□□□ -1.34
NKX6-1P78426 OLA1P1-201ENST00000396387 1189 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 TERF1P4-201ENST00000399580 1115 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 RSL24D1P1-201ENST00000404972 493 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC003071.2-201ENST00000423857 315 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX6-1P78426 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX6-1P78426 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 RPL24P8-201ENST00000446071 474 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 BUD31P2-201ENST00000449374 300 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC015864.1-201ENST00000496512 544 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 RN7SKP2-201ENST00000517003 319 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AP005597.1-201ENST00000534192 802 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 NF1P12-201ENST00000549593 583 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX6-1P78426 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
NKX6-1P78426 RPS28P1-201ENST00000604589 187 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AL096803.3-201ENST00000609032 532 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 GAPDHP41-201ENST00000613707 975 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AC104763.3-201ENST00000613765 618 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AC010538.1-201ENST00000615131 663 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 AC018926.1-201ENST00000616335 435 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC012213.2-201ENST00000562917 4597 ntBASIC6.66□□□□□ -1.34
NKX6-1P78426 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX6-1P78426 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX6-1P78426 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX6-1P78426 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX6-1P78426 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NKX6-1P78426 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX6-1P78426 ZNF101P1-201ENST00000435701 1720 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX6-1P78426 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 Z99129.4-201ENST00000624649 2435 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX6-1P78426 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX6-1P78426 AC036108.4-201ENST00000611654 2516 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
NKX6-1P78426 RNA5SP79-201ENST00000365193 109 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX6-1P78426 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NKX6-1P78426 AL355375.1-201ENST00000405686 392 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX6-1P78426 RN7SKP225-201ENST00000410405 352 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.65□□□□□ -1.34
NKX6-1P78426 MARK2P12-201ENST00000420129 585 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.65□□□□□ -1.34
NKX6-1P78426 UBE2D3P3-201ENST00000426992 425 ntBASIC6.65□□□□□ -1.34
NKX6-1P78426 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms