Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.78□□□□□ -1
ERCC3P19447 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC8.78□□□□□ -1
ERCC3P19447 RNA5SP396-201ENST00000364834 120 ntBASIC8.78□□□□□ -1
ERCC3P19447 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 SSX9-201ENST00000376909 591 ntBASIC8.78□□□□□ -1
ERCC3P19447 RNA5SP23-201ENST00000391006 105 ntBASIC8.78□□□□□ -1
ERCC3P19447 MTCO2P8-201ENST00000412213 658 ntBASIC8.78□□□□□ -1
ERCC3P19447 PPIAP30-201ENST00000415473 519 ntBASIC8.78□□□□□ -1
ERCC3P19447 AC127537.1-201ENST00000418183 748 ntBASIC8.78□□□□□ -1
ERCC3P19447 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 GLUD1P9-201ENST00000420997 1173 ntBASIC8.78□□□□□ -1
ERCC3P19447 AC007563.3-201ENST00000433233 371 ntBASIC8.78□□□□□ -1
ERCC3P19447 OR5M13P-201ENST00000433944 937 ntBASIC8.78□□□□□ -1
ERCC3P19447 CLNS1AP1-201ENST00000435954 682 ntBASIC8.78□□□□□ -1
ERCC3P19447 AL590682.1-201ENST00000437248 344 ntBASIC8.78□□□□□ -1
ERCC3P19447 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC8.78□□□□□ -1
ERCC3P19447 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 RPL7P61-201ENST00000451721 751 ntBASIC8.78□□□□□ -1
ERCC3P19447 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 RAB28P2-201ENST00000454299 641 ntBASIC8.78□□□□□ -1
ERCC3P19447 RPS4XP19-201ENST00000460237 736 ntBASIC8.78□□□□□ -1
ERCC3P19447 AC104982.1-201ENST00000478775 574 ntBASIC8.78□□□□□ -1
ERCC3P19447 RN7SL776P-201ENST00000493390 268 ntBASIC8.78□□□□□ -1
ERCC3P19447 AC105391.1-201ENST00000503155 1045 ntBASIC8.78□□□□□ -1
ERCC3P19447 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 LINC01085-203ENST00000511195 326 ntBASIC8.78□□□□□ -1
ERCC3P19447 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC8.78□□□□□ -1
ERCC3P19447 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC8.78□□□□□ -1
ERCC3P19447 SERPINA15P-201ENST00000529287 266 ntBASIC8.78□□□□□ -1
ERCC3P19447 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 MIR1273F-201ENST00000580581 99 ntBASIC8.78□□□□□ -1
ERCC3P19447 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.78□□□□□ -1
ERCC3P19447 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 AC008759.3-201ENST00000613300 508 ntBASIC8.78□□□□□ -1
ERCC3P19447 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.78□□□□□ -1
ERCC3P19447 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 AC130464.1-201ENST00000416201 1500 ntBASIC8.78□□□□□ -1
ERCC3P19447 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.78□□□□□ -1
ERCC3P19447 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.78□□□□□ -1
ERCC3P19447 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.78□□□□□ -1
ERCC3P19447 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
ERCC3P19447 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.77□□□□□ -1
ERCC3P19447 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.77□□□□□ -1
ERCC3P19447 AC008498.2-201ENST00000624033 2322 ntBASIC8.77□□□□□ -1
ERCC3P19447 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 THAP12P3-201ENST00000456373 2266 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 RNA5SP218-201ENST00000363188 109 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 RNA5SP260-201ENST00000363849 111 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 RNU6-1257P-201ENST00000384625 110 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ERCC3P19447 TYMSP1-201ENST00000407851 869 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 RNU4-27P-201ENST00000410889 139 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 AL158827.1-201ENST00000416300 391 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC8.77□□□□□ -1.01
ERCC3P19447 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC097527.1-201ENST00000437031 530 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC104164.3-201ENST00000467363 1258 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC021087.2-201ENST00000504656 1203 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 UGT2B29P-201ENST00000509021 973 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 HMGN1P17-201ENST00000513734 295 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC111000.6-201ENST00000514471 709 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 RNU6-1334P-201ENST00000516032 105 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC087894.1-201ENST00000538359 518 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms