Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 UQCRHP1-204ENST00000424609 274 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 FDPSP1-201ENST00000424976 1071 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL1P09341 AL731892.1-201ENST00000437364 1192 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL1P09341 CR383656.1-201ENST00000484916 377 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC091175.1-201ENST00000522168 572 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 NUTF2P2-201ENST00000551207 384 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 AL135978.1-201ENST00000553618 1266 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 DNM1P31-201ENST00000564149 696 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL1P09341 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL1P09341 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC068802.1-201ENST00000603420 732 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC239600.2-201ENST00000619615 1165 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC005725.1-201ENST00000577346 2607 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CXCL1P09341 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL1P09341 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC093278.2-201ENST00000564956 2485 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.3□□□□□ -1.56
CXCL1P09341 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC093844.1-201ENST00000514910 1361 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 RN7SKP36-201ENST00000363997 312 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 RNU1-59P-201ENST00000364829 162 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 RNU11-201ENST00000387069 134 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC023141.10-201ENST00000415634 200 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 RANP5-201ENST00000427731 655 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CXCL1P09341 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 AP1B1P1-202ENST00000448124 191 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 SLC25A51P1-201ENST00000468432 871 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 RN7SL89P-201ENST00000480252 283 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC097263.1-201ENST00000496795 606 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AC008967.1-201ENST00000504843 163 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AC008496.1-201ENST00000509131 295 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AC011352.2-201ENST00000514574 1016 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 IGLV1-62-201ENST00000518003 441 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC5.3□□□□□ -1.56
CXCL1P09341 AL360012.1-201ENST00000602813 131 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AC103974.2-201ENST00000611319 778 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 U1.25-201ENST00000614085 162 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 MIR6761-201ENST00000617899 72 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 U1.34-201ENST00000618578 162 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 U1.31-201ENST00000620022 160 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 AL355834.1-201ENST00000556602 3965 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms