Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC025040.2-201ENST00000558657 1852 ntBASIC7.51□□□□□ -1.21
RB1P06400 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 AC145138.1-201ENST00000512908 2851 ntBASIC7.5□□□□□ -1.21
RB1P06400 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
RB1P06400 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.5□□□□□ -1.21
RB1P06400 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 RNU1-65P-201ENST00000363919 148 ntBASIC7.5□□□□□ -1.21
RB1P06400 RPL5P8-201ENST00000396820 815 ntBASIC7.5□□□□□ -1.21
RB1P06400 VIM2P-201ENST00000402383 1294 ntBASIC7.5□□□□□ -1.21
RB1P06400 PRELID1P2-201ENST00000407805 396 ntBASIC7.5□□□□□ -1.21
RB1P06400 AL590240.2-201ENST00000413370 894 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 AC234771.2-201ENST00000445718 597 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC093166.3-201ENST00000448785 303 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 AP005202.1-201ENST00000489915 867 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 MTCYBP44-201ENST00000514835 823 ntBASIC7.5□□□□□ -1.21
RB1P06400 ST13P6-201ENST00000522430 1102 ntBASIC7.5□□□□□ -1.21
RB1P06400 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 IGLVV-66-201ENST00000523818 341 ntBASIC7.5□□□□□ -1.21
RB1P06400 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 PPIAP6-201ENST00000557078 499 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC096708.2-201ENST00000577676 512 ntBASIC7.5□□□□□ -1.21
RB1P06400 MIR3154-201ENST00000577829 84 ntBASIC7.5□□□□□ -1.21
RB1P06400 RN7SL230P-201ENST00000580835 303 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.5□□□□□ -1.21
RB1P06400 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.5□□□□□ -1.21
RB1P06400 AL355333.1-201ENST00000605632 279 ntBASIC7.5□□□□□ -1.21
RB1P06400 AC025162.2-201ENST00000619602 560 ntBASIC7.5□□□□□ -1.21
RB1P06400 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 AC005514.1-201ENST00000623521 208 ntBASIC7.5□□□□□ -1.21
RB1P06400 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 AC018688.1-201ENST00000636528 1754 ntBASIC7.5□□□□□ -1.21
RB1P06400 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.5□□□□□ -1.21
RB1P06400 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 AC138627.1-203ENST00000641872 1680 ntBASIC7.5□□□□□ -1.21
RB1P06400 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RB1P06400 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RB1P06400 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RB1P06400 HSPA8P11-201ENST00000508840 1898 ntBASIC7.49□□□□□ -1.21
RB1P06400 AL136981.1-203ENST00000451452 3844 ntBASIC7.49□□□□□ -1.21
RB1P06400 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 RNU6-1017P-201ENST00000363613 106 ntBASIC7.49□□□□□ -1.21
RB1P06400 RNA5SP85-201ENST00000365378 119 ntBASIC7.49□□□□□ -1.21
RB1P06400 CNN3P1-201ENST00000401596 935 ntBASIC7.49□□□□□ -1.21
RB1P06400 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.49□□□□□ -1.21
RB1P06400 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.49□□□□□ -1.21
RB1P06400 VN1R53P-201ENST00000429536 957 ntBASIC7.49□□□□□ -1.21
RB1P06400 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.49□□□□□ -1.21
RB1P06400 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.49□□□□□ -1.21
RB1P06400 RPSAP40-201ENST00000442343 891 ntBASIC7.49□□□□□ -1.21
RB1P06400 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RB1P06400 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.49□□□□□ -1.21
RB1P06400 AC068491.1-201ENST00000449539 1241 ntBASIC7.49□□□□□ -1.21
RB1P06400 AKR1D1P1-201ENST00000457236 936 ntBASIC7.49□□□□□ -1.21
RB1P06400 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms