Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC9.69□□□□□ -0.86
CPS1P31327 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC9.69□□□□□ -0.86
CPS1P31327 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC9.69□□□□□ -0.86
CPS1P31327 MED6-212ENST00000615788 1700 ntTSL 5 BASIC9.69□□□□□ -0.86
CPS1P31327 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
CPS1P31327 AC090771.1-201ENST00000585803 1618 ntBASIC9.69□□□□□ -0.86
CPS1P31327 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
CPS1P31327 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 AKAP17BP-201ENST00000431706 2719 ntBASIC9.69□□□□□ -0.86
CPS1P31327 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CPS1P31327 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CPS1P31327 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CPS1P31327 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC9.68□□□□□ -0.86
CPS1P31327 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC9.68□□□□□ -0.86
CPS1P31327 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 RNA5SP510-201ENST00000364697 99 ntBASIC9.68□□□□□ -0.86
CPS1P31327 COX4I1P2-201ENST00000447446 547 ntBASIC9.68□□□□□ -0.86
CPS1P31327 PRDX1P1-201ENST00000449329 596 ntBASIC9.68□□□□□ -0.86
CPS1P31327 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 SNRPCP6-201ENST00000528310 210 ntBASIC9.68□□□□□ -0.86
CPS1P31327 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 AC069234.4-201ENST00000621276 412 ntBASIC9.68□□□□□ -0.86
CPS1P31327 FO681491.1-202ENST00000623392 737 ntBASIC9.68□□□□□ -0.86
CPS1P31327 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC9.68□□□□□ -0.86
CPS1P31327 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 SLC9B1P1-201ENST00000331172 1337 ntBASIC9.68□□□□□ -0.86
CPS1P31327 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
CPS1P31327 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC9.68□□□□□ -0.86
CPS1P31327 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
CPS1P31327 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CPS1P31327 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC9.68□□□□□ -0.86
CPS1P31327 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
CPS1P31327 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CPS1P31327 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC9.67□□□□□ -0.86
CPS1P31327 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CPS1P31327 COX6B1P3-201ENST00000312310 260 ntBASIC9.67□□□□□ -0.86
CPS1P31327 RNA5SP321-201ENST00000362722 111 ntBASIC9.67□□□□□ -0.86
CPS1P31327 NOX1-203ENST00000372964 661 ntTSL 2 BASIC9.67□□□□□ -0.86
CPS1P31327 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC9.67□□□□□ -0.86
CPS1P31327 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC9.67□□□□□ -0.86
CPS1P31327 GSTA6P-201ENST00000424144 582 ntBASIC9.67□□□□□ -0.86
CPS1P31327 MTND6P12-201ENST00000428247 522 ntBASIC9.67□□□□□ -0.86
CPS1P31327 PFN1P11-201ENST00000445829 389 ntBASIC9.67□□□□□ -0.86
CPS1P31327 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC9.67□□□□□ -0.86
CPS1P31327 AL020997.1-201ENST00000446554 349 ntBASIC9.67□□□□□ -0.86
CPS1P31327 AC007998.1-201ENST00000474156 672 ntBASIC9.67□□□□□ -0.86
CPS1P31327 RN7SL629P-201ENST00000489622 285 ntBASIC9.67□□□□□ -0.86
CPS1P31327 RPL5P11-201ENST00000498068 893 ntBASIC9.67□□□□□ -0.86
CPS1P31327 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC9.67□□□□□ -0.86
CPS1P31327 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC9.67□□□□□ -0.86
CPS1P31327 CR382285.1-202ENST00000604687 547 ntBASIC9.67□□□□□ -0.86
CPS1P31327 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC9.67□□□□□ -0.86
CPS1P31327 AC129915.3-201ENST00000634128 948 ntBASIC9.67□□□□□ -0.86
CPS1P31327 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CPS1P31327 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CPS1P31327 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
CPS1P31327 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CPS1P31327 AC016582.1-202ENST00000636341 2982 ntBASIC9.67□□□□□ -0.86
CPS1P31327 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC9.67□□□□□ -0.86
CPS1P31327 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CPS1P31327 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC9.67□□□□□ -0.86
CPS1P31327 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC9.67□□□□□ -0.86
CPS1P31327 AP001527.1-201ENST00000566440 1957 ntBASIC9.67□□□□□ -0.86
CPS1P31327 MIR323A-201ENST00000362199 86 ntBASIC9.66□□□□□ -0.86
CPS1P31327 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms