Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC008555.1-201ENST00000561778 2757 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 SYT14P1-202ENST00000600441 1448 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 RPSAP60-201ENST00000415403 880 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 SPATA20P1-201ENST00000423089 438 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 RPL7AP71-201ENST00000451120 739 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 YRDCP3-201ENST00000456507 480 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 RN7SL836P-201ENST00000476140 296 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 NACAP5-201ENST00000509863 636 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 ACTR6P1-201ENST00000514311 1104 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC087272.1-201ENST00000523624 533 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 BTG1P1-201ENST00000540396 508 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC087821.1-201ENST00000623639 567 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC009950.2-201ENST00000636548 183 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 AC007603.3-201ENST00000636915 979 ntBASIC8.24□□□□□ -1.09
HLA-DOAP06340 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
HLA-DOAP06340 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-DOAP06340 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AC092701.1-201ENST00000623627 1551 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AL033519.1-201ENST00000407266 307 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 ETF1P1-206ENST00000427296 984 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 RPL12P49-201ENST00000441100 121 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 RN7SL654P-201ENST00000479178 292 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 RN7SL379P-201ENST00000479912 293 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 RNA5SP278-201ENST00000517055 102 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AC023827.2-201ENST00000566880 1061 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 DIMT1P1-201ENST00000603970 763 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 MKI67P1-201ENST00000604297 1460 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 DLEU2L-201ENST00000371086 3555 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-DOAP06340 AL121949.2-201ENST00000403446 1548 ntBASIC8.23□□□□□ -1.09
HLA-DOAP06340 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
HLA-DOAP06340 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms