Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHD7Q9P2D1 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 MFSD8-218ENST00000641186 4448 ntBASIC6.96□□□□□ -1.29
CHD7Q9P2D1 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 RNA5SP438-201ENST00000516561 112 ntBASIC6.96□□□□□ -1.29
CHD7Q9P2D1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 IGKV2-18-201ENST00000522607 343 ntBASIC6.96□□□□□ -1.29
CHD7Q9P2D1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHD7Q9P2D1 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC007938.1-201ENST00000562524 2902 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC017035.1-201ENST00000411999 1115 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC023194.2-201ENST00000465398 406 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 MRPS21P8-201ENST00000569196 235 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 FAM27E2-201ENST00000619668 403 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC130360.2-201ENST00000533477 1556 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 CASC19-238ENST00000641523 1558 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 RN7SKP232-201ENST00000410170 290 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC007394.1-201ENST00000421941 531 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 CXCR2P1-202ENST00000443392 1074 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC008536.1-201ENST00000602872 669 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 AC004477.3-201ENST00000614061 590 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC6.96□□□□□ -1.3
CHD7Q9P2D1 SAMMSON-214ENST00000641395 1264 ntBASIC6.96□□□□□ -1.3
CHD7Q9P2D1 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AC025162.2-201ENST00000619602 560 ntBASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 RNA5SP178-201ENST00000410380 128 ntBASIC6.95□□□□□ -1.3
CHD7Q9P2D1 RPS14P4-201ENST00000415880 418 ntBASIC6.95□□□□□ -1.3
CHD7Q9P2D1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AC096922.1-201ENST00000461635 651 ntBASIC6.95□□□□□ -1.3
CHD7Q9P2D1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AL136295.6-201ENST00000610486 658 ntBASIC6.95□□□□□ -1.3
CHD7Q9P2D1 AC005277.2-201ENST00000617898 390 ntBASIC6.95□□□□□ -1.3
CHD7Q9P2D1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.95□□□□□ -1.3
CHD7Q9P2D1 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHD7Q9P2D1 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms