Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CNTNAP3Q9BZ76 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RPL24P4-201ENST00000326586 421 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RNA5SP218-201ENST00000363188 109 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 PHBP1-201ENST00000392260 808 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL136968.2-201ENST00000407959 354 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 UBTFL3-201ENST00000418934 1024 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC010975.2-201ENST00000427781 588 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 PAICSP5-201ENST00000430406 1217 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 NEFLP1-201ENST00000436364 984 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RPL6P5-201ENST00000445678 828 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 CCNJP1-201ENST00000450600 1149 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC236972.4-201ENST00000458091 963 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RN7SL218P-201ENST00000464637 299 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RN7SL403P-201ENST00000481783 305 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC127024.1-201ENST00000490847 418 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 SNX18P25-201ENST00000510539 758 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 GAPDHP71-201ENST00000511530 1003 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RN7SKP244-201ENST00000516513 307 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC025881.1-201ENST00000518851 512 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC092709.1-201ENST00000521355 1045 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC084121.2-201ENST00000528788 264 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC005000.1-201ENST00000536192 288 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 UBE2FP2-201ENST00000566646 462 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC013553.2-201ENST00000604244 589 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL159169.3-201ENST00000608871 561 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC092681.3-201ENST00000609463 678 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC131902.3-201ENST00000611767 581 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 CARMN-212ENST00000614896 536 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL121985.3-201ENST00000620690 523 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL138693.1-201ENST00000622219 129 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AL121785.1-201ENST00000624745 708 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC104447.1-201ENST00000624214 2124 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 CCT5P1-201ENST00000502314 1618 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 AC132825.3-201ENST00000562182 4710 ntBASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CNTNAP3Q9BZ76 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 AL590426.1-201ENST00000440811 2285 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 CBX3P1-201ENST00000325243 554 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 AC093392.1-201ENST00000366280 340 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 MIR181C-201ENST00000384881 110 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 MT-TH-201ENST00000387441 69 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 VDAC2P1-201ENST00000399358 958 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 AL139806.1-201ENST00000403057 1002 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 AL590004.1-201ENST00000405321 300 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 OR2W4P-201ENST00000406496 926 ntBASIC8.2□□□□□ -1.1
CNTNAP3Q9BZ76 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms