Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC087045.3-201ENST00000623046 2468 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 RNA5SP483-201ENST00000363431 118 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC226101.1-201ENST00000401483 387 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 VN1R33P-201ENST00000411800 887 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AL354794.2-201ENST00000424795 1248 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 TRGV7-201ENST00000427089 353 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC244505.2-201ENST00000435089 759 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC005040.1-201ENST00000437783 482 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 NUCKS1P1-201ENST00000452067 703 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 MRPS21P1-201ENST00000453850 223 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC025181.1-201ENST00000477507 416 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 RN7SL338P-201ENST00000481467 293 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC097460.2-201ENST00000511857 741 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 OR8K2P-201ENST00000524645 927 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AP003385.2-201ENST00000524910 973 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC007136.1-201ENST00000589141 199 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC009955.2-201ENST00000597288 542 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 U47924.1-201ENST00000606539 434 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AL352984.2-201ENST00000611153 546 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC005383.1-201ENST00000622689 534 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC233280.20-201ENST00000637412 416 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC083806.2-201ENST00000617795 2685 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 WNK1-220ENST00000574564 1401 ntBASIC6.66□□□□□ -1.34
SNX18Q96RF0 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SNX18Q96RF0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNX18Q96RF0 AP003175.1-201ENST00000641383 6658 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC024341.1-201ENST00000526444 1552 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AC022306.1-201ENST00000560489 1562 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 CCDC150P1-201ENST00000537123 2215 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 SSX6-201ENST00000376932 562 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 RNA5SP18-201ENST00000390935 121 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNX18Q96RF0 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 RPL5P28-201ENST00000418634 693 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 HSFY7P-201ENST00000432672 318 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.65□□□□□ -1.34
SNX18Q96RF0 AL354983.1-201ENST00000434580 906 ntBASIC6.65□□□□□ -1.34
SNX18Q96RF0 HSFY8P-201ENST00000437934 318 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms