Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AL513218.1-201ENST00000606527 391 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 U47924.1-201ENST00000606539 434 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC106795.5-201ENST00000623288 454 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC034229.2-201ENST00000566945 2508 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 AC090132.1-201ENST00000524071 1480 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VMP1Q96GC9 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VMP1Q96GC9 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.97□□□□□ -1.29
VMP1Q96GC9 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.96□□□□□ -1.29
VMP1Q96GC9 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VMP1Q96GC9 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.96□□□□□ -1.29
VMP1Q96GC9 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.96□□□□□ -1.29
VMP1Q96GC9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 AL139806.1-201ENST00000403057 1002 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 RPSAP44-201ENST00000406712 884 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC013268.2-201ENST00000420753 337 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 PPIL1P1-201ENST00000423936 499 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 GAPDHP51-201ENST00000426454 1000 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 NPM1P48-201ENST00000436002 853 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC019185.3-201ENST00000438805 323 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 LIN28AP2-201ENST00000445283 458 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 GTF2F2P2-201ENST00000445825 721 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 SS18L2P1-201ENST00000445923 213 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC114928.1-201ENST00000446516 415 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 RN7SL145P-201ENST00000469955 296 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 AP005597.2-201ENST00000526238 341 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 MIR4685-201ENST00000578185 69 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC013731.1-201ENST00000604340 883 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 AC139493.1-201ENST00000604368 397 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 AL033543.1-201ENST00000623440 13454 ntBASIC6.96□□□□□ -1.3
VMP1Q96GC9 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VMP1Q96GC9 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.96□□□□□ -1.3
VMP1Q96GC9 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VMP1Q96GC9 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VMP1Q96GC9 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VMP1Q96GC9 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VMP1Q96GC9 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VMP1Q96GC9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VMP1Q96GC9 RBMX2P2-201ENST00000257020 946 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 AL078621.1-201ENST00000272567 768 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 RN7SKP225-201ENST00000410405 352 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AC244505.2-201ENST00000435089 759 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AC027667.1-201ENST00000545814 304 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.95□□□□□ -1.3
VMP1Q96GC9 AC108451.2-201ENST00000603875 538 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 CR382285.1-202ENST00000604687 547 ntBASIC6.95□□□□□ -1.3
VMP1Q96GC9 MIR6731-201ENST00000614863 72 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms