Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC124045.1-201ENST00000606008 1953 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 MAPK10-290ENST00000641237 2826 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 Y_RNA.169-201ENST00000363745 96 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 RNU4-28P-201ENST00000364739 141 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 SNORA10B-201ENST00000384458 133 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 SNORA70I-201ENST00000384544 135 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 HSPD1P16-201ENST00000402302 394 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 MIR1272-201ENST00000408106 129 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 KRR1P1-201ENST00000419430 803 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 RPSAP1-201ENST00000421328 880 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AL138479.1-201ENST00000426913 484 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 SNX18P14-201ENST00000429308 574 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 HMGN1P6-201ENST00000438508 291 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 OR7E62P-201ENST00000456741 477 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 RN7SL706P-201ENST00000460079 292 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC091860.1-201ENST00000505723 432 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC105185.1-201ENST00000518705 535 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC100854.1-201ENST00000520351 341 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC109635.3-201ENST00000529536 185 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AP004607.5-201ENST00000532034 217 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 CYP4A44P-201ENST00000569984 154 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AP006587.6-201ENST00000582128 1091 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC017083.3-201ENST00000609955 700 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AL139407.1-201ENST00000613826 1175 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC010538.1-201ENST00000615131 663 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC004801.6-201ENST00000616571 978 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 MAPK10-319ENST00000641459 2542 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SHKBP1Q8TBC3 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 SNORD15A-201ENST00000384214 148 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 COX6A1P3-201ENST00000404167 293 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 RN7SKP117-201ENST00000410175 264 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 SLC20A1P1-201ENST00000413906 956 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 MTATP6P20-201ENST00000414147 562 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 RAD23BP2-201ENST00000416003 1207 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 RPL22P18-201ENST00000417197 377 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 TAS2R2P-201ENST00000421146 910 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 NEK4P1-201ENST00000433383 879 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 Z85994.2-201ENST00000434327 452 ntBASIC8.05□□□□□ -1.12
SHKBP1Q8TBC3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms