Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 Z68694.1-201ENST00000413929 841 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 CDY17P-201ENST00000414121 1282 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC12.03□□□□□ -0.48
SMARCA4P51532 AC073109.1-201ENST00000445066 978 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 AC097463.1-201ENST00000447288 481 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 HMGB1P7-201ENST00000450921 612 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 HLA-DPA3-207ENST00000454398 229 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 SULT1D1P-201ENST00000458020 882 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC12.03□□□□□ -0.48
SMARCA4P51532 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC12.03□□□□□ -0.48
SMARCA4P51532 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC12.03□□□□□ -0.48
SMARCA4P51532 AC008521.2-201ENST00000591021 259 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 MIR6811-201ENST00000620409 58 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC12.03□□□□□ -0.48
SMARCA4P51532 FO681491.1-202ENST00000623392 737 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC12.03□□□□□ -0.48
SMARCA4P51532 AC083806.2-201ENST00000617795 2685 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMARCA4P51532 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC12.03□□□□□ -0.48
SMARCA4P51532 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SMARCA4P51532 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
SMARCA4P51532 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMARCA4P51532 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMARCA4P51532 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC12.02□□□□□ -0.48
SMARCA4P51532 KARSP1-201ENST00000451871 1752 ntBASIC12.02□□□□□ -0.48
SMARCA4P51532 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 RN7SKP206-201ENST00000410823 293 ntBASIC12.02□□□□□ -0.49
SMARCA4P51532 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC12.02□□□□□ -0.49
SMARCA4P51532 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC12.02□□□□□ -0.49
SMARCA4P51532 AC104109.1-201ENST00000498563 436 ntBASIC12.02□□□□□ -0.49
SMARCA4P51532 AC021220.1-201ENST00000507445 630 ntBASIC12.02□□□□□ -0.49
SMARCA4P51532 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC12.02□□□□□ -0.49
SMARCA4P51532 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC12.02□□□□□ -0.49
SMARCA4P51532 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC12.02□□□□□ -0.49
SMARCA4P51532 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 AL589863.1-201ENST00000595383 631 ntBASIC12.02□□□□□ -0.49
SMARCA4P51532 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC12.02□□□□□ -0.49
SMARCA4P51532 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC12.02□□□□□ -0.49
SMARCA4P51532 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC12.02□□□□□ -0.49
SMARCA4P51532 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC12.02□□□□□ -0.49
SMARCA4P51532 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMARCA4P51532 VN2R1P-201ENST00000449668 1743 ntBASIC12.02□□□□□ -0.49
SMARCA4P51532 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
SMARCA4P51532 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC12.01□□□□□ -0.49
SMARCA4P51532 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC12.01□□□□□ -0.49
SMARCA4P51532 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC12.01□□□□□ -0.49
SMARCA4P51532 AC133965.1-201ENST00000452984 354 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 RN7SL214P-201ENST00000487317 265 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 AP005136.2-201ENST00000583253 1049 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 FAM72A-208ENST00000607379 1139 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 AC129915.3-201ENST00000634128 948 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 AC103703.1-201ENST00000634783 663 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SMARCA4P51532 TMC3-AS1-206ENST00000612811 2726 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 HSPD1P4-201ENST00000547203 1702 ntBASIC12.01□□□□□ -0.49
SMARCA4P51532 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC12.01□□□□□ -0.49
SMARCA4P51532 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMARCA4P51532 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SMARCA4P51532 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC12□□□□□ -0.49
SMARCA4P51532 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 AC009963.3-201ENST00000458090 486 ntBASIC12□□□□□ -0.49
SMARCA4P51532 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 RPS4XP23-201ENST00000487801 237 ntBASIC12□□□□□ -0.49
SMARCA4P51532 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 AC106872.4-201ENST00000510050 523 ntBASIC12□□□□□ -0.49
SMARCA4P51532 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC12□□□□□ -0.49
SMARCA4P51532 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC12□□□□□ -0.49
SMARCA4P51532 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMARCA4P51532 ERG-204ENST00000398907 4809 ntTSL 5 BASIC12□□□□□ -0.49
SMARCA4P51532 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms