Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.3□□□□□ -1.24
CHRNB1P11230 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 AC090132.1-201ENST00000524071 1480 ntBASIC7.3□□□□□ -1.24
CHRNB1P11230 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.3□□□□□ -1.24
CHRNB1P11230 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHRNB1P11230 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 AC095038.1-201ENST00000429248 1591 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AC092646.2-201ENST00000431242 2095 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
CHRNB1P11230 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CHRNB1P11230 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 AC090181.3-201ENST00000624777 1514 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 RNA5SP472-201ENST00000363868 119 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 RN7SKP191-201ENST00000364713 306 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 RNA5SP152-201ENST00000365184 110 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 RNA5SP176-201ENST00000390956 110 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 AC068138.1-201ENST00000412635 217 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.29□□□□□ -1.24
CHRNB1P11230 RPL6P21-201ENST00000418672 846 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.29□□□□□ -1.24
CHRNB1P11230 SPATA20P1-201ENST00000423089 438 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AL596268.1-201ENST00000427910 1048 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 HSPE1P27-201ENST00000430808 296 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 MYO5BP3-201ENST00000431872 1279 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.29□□□□□ -1.24
CHRNB1P11230 AC010086.1-201ENST00000437359 1052 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 RPSAP7-201ENST00000456871 885 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 RN7SL83P-201ENST00000468131 297 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.29□□□□□ -1.24
CHRNB1P11230 AP001000.1-201ENST00000526843 742 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.29□□□□□ -1.24
CHRNB1P11230 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 AC090888.3-201ENST00000558917 509 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 PRR13P5-201ENST00000596581 442 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AC011500.1-201ENST00000601963 469 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AC016405.2-201ENST00000607393 312 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AL121809.2-201ENST00000613169 341 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.29□□□□□ -1.24
CHRNB1P11230 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.29□□□□□ -1.24
CHRNB1P11230 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.29□□□□□ -1.24
CHRNB1P11230 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.29□□□□□ -1.24
CHRNB1P11230 RAD17P2-201ENST00000451754 1977 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 PPBPP2-201ENST00000513150 1362 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 AC051619.3-201ENST00000560646 2426 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 AL356361.1-201ENST00000400943 1459 ntBASIC7.29□□□□□ -1.24
CHRNB1P11230 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHRNB1P11230 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
CHRNB1P11230 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CHRNB1P11230 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CHRNB1P11230 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CHRNB1P11230 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CHRNB1P11230 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 AL590143.1-201ENST00000405071 138 ntBASIC7.28□□□□□ -1.24
CHRNB1P11230 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.28□□□□□ -1.24
CHRNB1P11230 RPL7AP51-201ENST00000422016 760 ntBASIC7.28□□□□□ -1.24
CHRNB1P11230 FBP2P1-202ENST00000424473 530 ntBASIC7.28□□□□□ -1.24
CHRNB1P11230 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.28□□□□□ -1.24
CHRNB1P11230 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.28□□□□□ -1.24
CHRNB1P11230 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHRNB1P11230 RN7SL143P-201ENST00000496780 297 ntBASIC7.28□□□□□ -1.24
CHRNB1P11230 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms