Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
SSX4O60224 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 AL606490.2-201ENST00000457562 1330 ntBASIC6.49□□□□□ -1.37
SSX4O60224 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX4O60224 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX4O60224 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 UGT2B27P-201ENST00000505092 1620 ntBASIC6.48□□□□□ -1.37
SSX4O60224 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX4O60224 RN7SKP211-201ENST00000363328 315 ntBASIC6.48□□□□□ -1.37
SSX4O60224 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX4O60224 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX4O60224 RPL24P7-201ENST00000399435 453 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX4O60224 MTND1P10-201ENST00000426108 832 ntBASIC6.48□□□□□ -1.37
SSX4O60224 SNX18P14-201ENST00000429308 574 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC099344.1-201ENST00000433548 492 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX4O60224 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 PMS2P9-201ENST00000441237 515 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX4O60224 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX4O60224 AC092570.2-201ENST00000452117 1143 ntBASIC6.48□□□□□ -1.37
SSX4O60224 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 RN7SL180P-201ENST00000466769 294 ntBASIC6.48□□□□□ -1.37
SSX4O60224 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX4O60224 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 RN7SL516P-201ENST00000496127 297 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX4O60224 LDHAP1-201ENST00000509421 992 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX4O60224 FDPSP3-201ENST00000556903 1013 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX4O60224 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX4O60224 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX4O60224 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX4O60224 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX4O60224 OR7A8P-201ENST00000595427 913 ntBASIC6.48□□□□□ -1.37
SSX4O60224 PTCHD3P1-201ENST00000612350 537 ntBASIC6.48□□□□□ -1.37
SSX4O60224 PCA3_2.1-201ENST00000612507 409 ntBASIC6.48□□□□□ -1.37
SSX4O60224 MIR6883-201ENST00000614952 78 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC027506.1-201ENST00000621395 198 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 FKBP1AP4-201ENST00000631775 336 ntBASIC6.48□□□□□ -1.37
SSX4O60224 AC119674.1-209ENST00000642031 997 ntBASIC6.48□□□□□ -1.37
SSX4O60224 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 VEZF1P1-201ENST00000423931 1541 ntBASIC6.48□□□□□ -1.37
SSX4O60224 NF1P7-201ENST00000612076 1530 ntBASIC6.48□□□□□ -1.37
SSX4O60224 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX4O60224 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX4O60224 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX4O60224 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SSX4O60224 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX4O60224 AL669831.5-218ENST00000591702 1873 ntBASIC6.47□□□□□ -1.37
SSX4O60224 AP000547.3-204ENST00000588548 2523 ntBASIC6.47□□□□□ -1.37
SSX4O60224 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSX4O60224 OR9K2-201ENST00000305377 1122 ntBASIC6.47□□□□□ -1.37
SSX4O60224 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX4O60224 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX4O60224 MEAF6P1-201ENST00000416092 327 ntBASIC6.47□□□□□ -1.37
SSX4O60224 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX4O60224 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX4O60224 AC091390.2-201ENST00000432573 374 ntBASIC6.47□□□□□ -1.37
SSX4O60224 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms