Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LCOR-201ENST00000286067 4542 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 EEF1GP6-201ENST00000402309 905 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 OR7E7P-201ENST00000455678 1012 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC027801.3-201ENST00000515049 698 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AP001803.1-201ENST00000525668 147 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC089984.3-201ENST00000552838 363 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 BMS1P16-201ENST00000556075 1147 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AL031846.1-201ENST00000560933 314 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC093283.1-201ENST00000565306 1075 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC092032.1-201ENST00000603090 165 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC135068.11-201ENST00000636378 921 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AP003119.3-201ENST00000566747 4192 ntBASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.49□□□□□ -1.37
NPIPA3F8WFD2 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC007998.4-201ENST00000612496 2533 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC123912.3-201ENST00000600907 1367 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 MIR187-201ENST00000385062 109 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RNU1-56P-201ENST00000391303 164 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 PDCL3P5-201ENST00000398028 722 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RBBP4P4-201ENST00000398588 1289 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RN7SKP268-201ENST00000411107 316 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 SMC4P1-201ENST00000414479 527 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 YWHAZP5-201ENST00000419975 730 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 FTLP17-201ENST00000432567 525 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RBMY2AP-201ENST00000445405 1157 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RBMY2CP-201ENST00000448575 1157 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms