Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 ASNSP6-201ENST00000592770 1618 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC127070.3-201ENST00000503695 3263 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 RNA5SP177-201ENST00000410122 107 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 RN7SKP254-201ENST00000410685 310 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 RN7SKP85-201ENST00000411349 318 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AL355994.1-201ENST00000424379 260 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 CDK7P1-201ENST00000434574 693 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AL353803.3-201ENST00000444641 335 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 OR51P1P-201ENST00000447547 942 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC019080.2-201ENST00000453859 394 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 RPL5P15-201ENST00000475870 897 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AL928654.1-201ENST00000476081 354 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC106760.2-201ENST00000504159 619 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC024614.1-201ENST00000577546 307 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 SNORA70D-201ENST00000578836 135 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 PRR13P5-201ENST00000596581 442 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC024451.4-201ENST00000602578 752 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AL034408.1-201ENST00000637712 664 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 MAPK10-344ENST00000641718 3746 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AL031123.3-201ENST00000623345 1837 ntBASIC7.26□□□□□ -1.25
PCDH9Q9HC56 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDH9Q9HC56 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RNU4-81P-201ENST00000363561 144 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RNA5SP472-201ENST00000363868 119 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RPL9P21-201ENST00000392269 505 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 SLC25A5P7-201ENST00000406156 896 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RN7SKP271-201ENST00000410528 320 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GRPEL2P2-201ENST00000421856 670 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 FABP5P1-201ENST00000423401 411 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 FABP5P2-201ENST00000439042 408 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC011742.2-201ENST00000443818 352 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 SDHCP3-201ENST00000445371 506 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RN7SL306P-201ENST00000492941 296 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 OR10J9P-201ENST00000511932 987 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RN7SKP98-201ENST00000517070 156 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms