Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 SNORA70.9-201ENST00000384370 135 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC096537.2-201ENST00000413707 714 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 EEF1A1P34-201ENST00000419888 1267 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AK3P5-201ENST00000432033 519 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 SDHCP3-201ENST00000445371 506 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 CDC42P2-201ENST00000448566 569 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 RN7SL561P-201ENST00000488553 281 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 GAPDHP44-201ENST00000513513 1007 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AP001124.1-201ENST00000529628 385 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC012181.2-201ENST00000570210 699 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 RN7SL49P-201ENST00000581392 298 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC091768.1-201ENST00000609258 930 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AL022324.3-201ENST00000609330 747 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC245407.2-201ENST00000614199 451 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC004836.1-201ENST00000623032 634 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AP000356.4-201ENST00000639500 172 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 AC068769.1-201ENST00000474767 2426 ntBASIC5.18□□□□□ -1.58
NUP35Q8NFH5 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP35Q8NFH5 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 IMMTP1-201ENST00000435590 2219 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 TRIM60P14-201ENST00000513444 1419 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 MAPK10-357ENST00000641831 2858 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 TTC41P-205ENST00000551270 3963 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 TAC1-203ENST00000350485 975 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 RNA5SP514-201ENST00000363717 111 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 RNA5SP79-201ENST00000365193 109 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 KRT18P52-201ENST00000404956 846 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 RNA5SP251-201ENST00000410614 137 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 RPL3P8-201ENST00000432928 1191 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 KIF3AP1-201ENST00000454055 611 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 TUBB4BP2-201ENST00000454125 798 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AC002075.1-201ENST00000457396 676 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 RN7SL89P-201ENST00000480252 283 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 RN7SL434P-201ENST00000495872 271 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 SNORA58-201ENST00000505219 137 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AC087752.2-201ENST00000521219 281 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 CRADD-210ENST00000552033 622 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AL109628.1-201ENST00000556877 366 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AC008870.2-201ENST00000568262 1024 ntBASIC5.17□□□□□ -1.58
NUP35Q8NFH5 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms