Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNORA70.8-201ENST00000384231 136 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 IFNA12P-201ENST00000413147 571 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 OR7E117P-201ENST00000422682 1112 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC073900.1-201ENST00000429766 776 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC079781.1-201ENST00000441505 394 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 ARMC8P1-201ENST00000443069 1289 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 RN7SL688P-201ENST00000471754 275 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 PGBD4P1-201ENST00000473644 407 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 IGLV1-62-201ENST00000518003 441 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC087257.2-201ENST00000538759 928 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC126177.6-201ENST00000550420 1009 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 OR4N3P-201ENST00000559395 818 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC023827.2-201ENST00000566880 1061 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC012181.2-201ENST00000570210 699 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 RN7SL667P-201ENST00000582817 298 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 RPSAP66-201ENST00000592196 606 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC087072.2-201ENST00000621060 682 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 AC135068.4-201ENST00000622949 925 ntBASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC50Q8IVM0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AC112243.1-201ENST00000623949 3851 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 RN7SKP62-201ENST00000384539 329 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 PPIAP30-201ENST00000415473 519 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AL627308.2-201ENST00000420014 432 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 TAS2R2P-201ENST00000421146 910 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 OR3B1P-201ENST00000437536 893 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 RPS14P8-201ENST00000478778 369 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AC131233.1-201ENST00000479200 955 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AC120057.1-201ENST00000483947 663 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 EGLN3P1-201ENST00000541727 720 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 MIR3187-201ENST00000583431 70 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 FAM27E3-202ENST00000614611 340 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 EIF3EP2-201ENST00000423042 1814 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 DDX10P2-201ENST00000417796 2614 ntBASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CCDC50Q8IVM0 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ARMCX7P-201ENST00000372828 562 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC009237.9-201ENST00000414800 347 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 UQCRHP1-204ENST00000424609 274 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 NPM1P30-201ENST00000425092 828 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 PRPS1P2-201ENST00000430496 937 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RN7SL797P-201ENST00000486314 297 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC074386.1-206ENST00000487102 761 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC117383.2-201ENST00000514722 322 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms