Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 PGBD4P1-201ENST00000473644 407 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 SCARNA6-201ENST00000515982 265 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC016144.1-201ENST00000548175 1087 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AL031846.1-201ENST00000560933 314 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 MTATP6P25-201ENST00000574491 261 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC012640.3-201ENST00000607847 430 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC011471.4-201ENST00000638271 216 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC099654.11-201ENST00000638857 294 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC127070.3-201ENST00000503695 3263 ntBASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNF549Q6P9A3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 FAUP2-201ENST00000394301 401 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 MIR1231-201ENST00000408101 92 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 RN7SKP39-201ENST00000410773 322 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC134879.1-201ENST00000426062 394 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 MRPL49P1-201ENST00000505951 535 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC095057.1-201ENST00000507583 168 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 NACAP6-201ENST00000509572 622 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 SUMO2P7-201ENST00000511179 285 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 RNA5SP518-201ENST00000515957 119 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 EEF1B2P2-201ENST00000519625 676 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AP001803.1-201ENST00000525668 147 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 EIF4A3P1-201ENST00000578499 647 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC005070.2-201ENST00000604391 260 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC111186.1-201ENST00000604684 130 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC006213.5-201ENST00000619673 288 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AL356585.10-201ENST00000641883 123 ntBASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNF549Q6P9A3 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms