Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRR13P3-201ENST00000603578 376 ntBASIC6.68□□□□□ -1.34
SUMO3P55854 AC008385.1-201ENST00000604421 355 ntBASIC6.68□□□□□ -1.34
SUMO3P55854 AL355802.4-201ENST00000607635 548 ntBASIC6.68□□□□□ -1.34
SUMO3P55854 CXADRP3-202ENST00000617265 1100 ntBASIC6.68□□□□□ -1.34
SUMO3P55854 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.68□□□□□ -1.34
SUMO3P55854 AC068234.2-201ENST00000619646 522 ntBASIC6.68□□□□□ -1.34
SUMO3P55854 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.68□□□□□ -1.34
SUMO3P55854 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SUMO3P55854 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SUMO3P55854 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SUMO3P55854 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.68□□□□□ -1.34
SUMO3P55854 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SUMO3P55854 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SUMO3P55854 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.68□□□□□ -1.34
SUMO3P55854 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.68□□□□□ -1.34
SUMO3P55854 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SUMO3P55854 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.68□□□□□ -1.34
SUMO3P55854 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
SUMO3P55854 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SUMO3P55854 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.68□□□□□ -1.34
SUMO3P55854 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SUMO3P55854 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 AC009948.3-201ENST00000603415 1798 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
SUMO3P55854 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 ARMCX7P-201ENST00000372828 562 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AL356057.1-202ENST00000402263 756 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 RBM22P7-201ENST00000421321 280 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 ELOCP6-201ENST00000429066 328 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.67□□□□□ -1.34
SUMO3P55854 PMS2P11-201ENST00000451831 574 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 ELOCP12-201ENST00000458706 328 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 RN7SL791P-201ENST00000467868 295 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 RN7SL182P-201ENST00000496499 300 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 OR4V1P-201ENST00000525394 1140 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 OR4A1P-201ENST00000532342 920 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AL049869.4-201ENST00000555669 178 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.67□□□□□ -1.34
SUMO3P55854 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 UBE2CP4-201ENST00000561405 535 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 AC068408.1-201ENST00000577406 1144 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.67□□□□□ -1.34
SUMO3P55854 MIMT1-201ENST00000597105 1050 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.67□□□□□ -1.34
SUMO3P55854 MIR6737-201ENST00000617385 70 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AP003499.2-201ENST00000624100 483 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 AL590396.3-201ENST00000636334 300 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 SAMMSON-222ENST00000641901 2727 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SUMO3P55854 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 AC008555.1-201ENST00000561778 2757 ntBASIC6.67□□□□□ -1.34
SUMO3P55854 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.67□□□□□ -1.34
SUMO3P55854 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.67□□□□□ -1.34
SUMO3P55854 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SUMO3P55854 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SUMO3P55854 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SUMO3P55854 AL136298.2-201ENST00000556497 1570 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms