Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SNRPBP1-201ENST00000443634 282 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 H3F3AP3-201ENST00000497682 407 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.13□□□□□ -1.11
COL4A5P29400 CYCSP38-201ENST00000559840 322 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
COL4A5P29400 AL589863.1-201ENST00000595383 631 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.13□□□□□ -1.11
COL4A5P29400 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.13□□□□□ -1.11
COL4A5P29400 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
COL4A5P29400 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 PCDHA10-203ENST00000562220 12358 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.13□□□□□ -1.11
COL4A5P29400 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.12□□□□□ -1.11
COL4A5P29400 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.12□□□□□ -1.11
COL4A5P29400 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.12□□□□□ -1.11
COL4A5P29400 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.12□□□□□ -1.11
COL4A5P29400 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.12□□□□□ -1.11
COL4A5P29400 AL583856.1-201ENST00000454078 1101 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 AC135721.2-201ENST00000464237 300 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.12□□□□□ -1.11
COL4A5P29400 EEF1B2P2-201ENST00000519625 676 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 OR4A21P-201ENST00000532759 944 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.12□□□□□ -1.11
COL4A5P29400 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 AL136097.3-201ENST00000611097 505 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 AC026124.2-201ENST00000621847 656 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.12□□□□□ -1.11
COL4A5P29400 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.12□□□□□ -1.11
COL4A5P29400 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL4A5P29400 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
COL4A5P29400 AC130365.1-201ENST00000530524 1553 ntBASIC8.12□□□□□ -1.11
COL4A5P29400 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.11□□□□□ -1.11
COL4A5P29400 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
COL4A5P29400 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 PAICSP2-201ENST00000429118 1150 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
COL4A5P29400 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 AC073109.1-201ENST00000445066 978 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 AC104109.1-201ENST00000498563 436 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 OR7E99P-201ENST00000505750 922 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 MIR3135A-201ENST00000578460 77 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AL096712.1-201ENST00000614561 159 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
COL4A5P29400 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 OR5M2P-202ENST00000641241 4242 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AC132219.2-201ENST00000624416 2327 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 DDX43P1-201ENST00000510713 1763 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 SNORA51.1-201ENST00000363243 140 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms