Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 MFSD8-218ENST00000641186 4448 ntBASIC8.83□□□□□ -1
ERCC3P19447 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 AL645568.2-201ENST00000432815 1337 ntBASIC8.83□□□□□ -1
ERCC3P19447 LINC02128-205ENST00000641755 1334 ntBASIC8.83□□□□□ -1
ERCC3P19447 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 AF131215.2-201ENST00000531549 1710 ntBASIC8.83□□□□□ -1
ERCC3P19447 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 PTMAP8-201ENST00000397729 342 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC113608.1-201ENST00000398740 305 ntBASIC8.83□□□□□ -1
ERCC3P19447 MIR1272-201ENST00000408106 129 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 RANP4-201ENST00000413361 655 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC023141.10-201ENST00000415634 200 ntBASIC8.83□□□□□ -1
ERCC3P19447 AL161742.1-201ENST00000418154 584 ntBASIC8.83□□□□□ -1
ERCC3P19447 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.83□□□□□ -1
ERCC3P19447 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC8.83□□□□□ -1
ERCC3P19447 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 AC099344.1-201ENST00000433548 492 ntBASIC8.83□□□□□ -1
ERCC3P19447 AL354983.1-201ENST00000434580 906 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 NPM1P29-201ENST00000483112 803 ntBASIC8.83□□□□□ -1
ERCC3P19447 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 AC079768.1-201ENST00000503181 711 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.83□□□□□ -1
ERCC3P19447 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.83□□□□□ -1
ERCC3P19447 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 FDPSP3-201ENST00000556903 1013 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 AL078624.2-201ENST00000605063 554 ntBASIC8.83□□□□□ -1
ERCC3P19447 AL161729.2-201ENST00000605700 456 ntBASIC8.83□□□□□ -1
ERCC3P19447 AP001033.2-201ENST00000609701 1003 ntBASIC8.83□□□□□ -1
ERCC3P19447 AL356863.1-201ENST00000623378 1080 ntBASIC8.83□□□□□ -1
ERCC3P19447 FKBP1AP4-201ENST00000631775 336 ntBASIC8.83□□□□□ -1
ERCC3P19447 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 AL445250.1-203ENST00000641829 1535 ntBASIC8.83□□□□□ -1
ERCC3P19447 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 DDX50P1-201ENST00000438163 2400 ntBASIC8.83□□□□□ -1
ERCC3P19447 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
ERCC3P19447 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.83□□□□□ -1
ERCC3P19447 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
ERCC3P19447 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
ERCC3P19447 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
ERCC3P19447 AC104083.1-201ENST00000569449 2615 ntBASIC8.82□□□□□ -1
ERCC3P19447 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.82□□□□□ -1
ERCC3P19447 RN7SKP211-201ENST00000363328 315 ntBASIC8.82□□□□□ -1
ERCC3P19447 SNORA70G-201ENST00000383923 142 ntBASIC8.82□□□□□ -1
ERCC3P19447 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC8.82□□□□□ -1
ERCC3P19447 MTCO2P23-201ENST00000425216 680 ntBASIC8.82□□□□□ -1
ERCC3P19447 AC013262.1-201ENST00000426710 252 ntBASIC8.82□□□□□ -1
ERCC3P19447 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.82□□□□□ -1
ERCC3P19447 AC245517.2-201ENST00000442890 346 ntBASIC8.82□□□□□ -1
ERCC3P19447 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.82□□□□□ -1
ERCC3P19447 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC8.82□□□□□ -1
ERCC3P19447 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 AC016559.1-201ENST00000511420 199 ntBASIC8.82□□□□□ -1
ERCC3P19447 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.82□□□□□ -1
ERCC3P19447 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 NDFIP1P1-201ENST00000543144 525 ntBASIC8.82□□□□□ -1
ERCC3P19447 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC8.82□□□□□ -1
ERCC3P19447 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC8.82□□□□□ -1
ERCC3P19447 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.82□□□□□ -1
ERCC3P19447 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.82□□□□□ -1
ERCC3P19447 AC006116.5-201ENST00000591936 559 ntBASIC8.82□□□□□ -1
ERCC3P19447 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms