Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.56□□□□□ -1.2
RB1P06400 RPL7AP71-201ENST00000451120 739 ntBASIC7.56□□□□□ -1.2
RB1P06400 PTMAP1-205ENST00000455552 325 ntBASIC7.56□□□□□ -1.2
RB1P06400 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 RN7SL390P-201ENST00000470634 284 ntBASIC7.56□□□□□ -1.2
RB1P06400 RPS3AP49-201ENST00000472161 790 ntBASIC7.56□□□□□ -1.2
RB1P06400 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.56□□□□□ -1.2
RB1P06400 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.56□□□□□ -1.2
RB1P06400 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.56□□□□□ -1.2
RB1P06400 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.56□□□□□ -1.2
RB1P06400 AC016252.1-201ENST00000609721 474 ntBASIC7.56□□□□□ -1.2
RB1P06400 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 MIR6806-201ENST00000622141 64 ntBASIC7.56□□□□□ -1.2
RB1P06400 AC127071.2-201ENST00000623293 527 ntBASIC7.56□□□□□ -1.2
RB1P06400 AC017037.4-201ENST00000624526 826 ntBASIC7.56□□□□□ -1.2
RB1P06400 AL139254.2-202ENST00000641937 1156 ntBASIC7.56□□□□□ -1.2
RB1P06400 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.56□□□□□ -1.2
RB1P06400 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 AC016930.1-201ENST00000468766 2205 ntBASIC7.56□□□□□ -1.2
RB1P06400 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RB1P06400 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
RB1P06400 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.56□□□□□ -1.2
RB1P06400 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RB1P06400 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RB1P06400 RNU6-1055P-201ENST00000391085 107 ntBASIC7.55□□□□□ -1.2
RB1P06400 RPL34P19-201ENST00000415903 342 ntBASIC7.55□□□□□ -1.2
RB1P06400 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 TRGV5P-201ENST00000419915 354 ntBASIC7.55□□□□□ -1.2
RB1P06400 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 AC007919.2-201ENST00000444110 511 ntBASIC7.55□□□□□ -1.2
RB1P06400 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 RPL7L1P11-201ENST00000446092 721 ntBASIC7.55□□□□□ -1.2
RB1P06400 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 RN7SL180P-201ENST00000466769 294 ntBASIC7.55□□□□□ -1.2
RB1P06400 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 RN7SL170P-201ENST00000487098 295 ntBASIC7.55□□□□□ -1.2
RB1P06400 RPL37P23-201ENST00000492641 294 ntBASIC7.55□□□□□ -1.2
RB1P06400 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.55□□□□□ -1.2
RB1P06400 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.55□□□□□ -1.2
RB1P06400 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.55□□□□□ -1.2
RB1P06400 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 AC015801.1-201ENST00000585651 153 ntBASIC7.55□□□□□ -1.2
RB1P06400 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 AC005828.7-201ENST00000607331 556 ntBASIC7.55□□□□□ -1.2
RB1P06400 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 MIR6778-201ENST00000617912 73 ntBASIC7.55□□□□□ -1.2
RB1P06400 AC073593.1-201ENST00000624500 411 ntBASIC7.55□□□□□ -1.2
RB1P06400 AC005858.3-201ENST00000624756 589 ntBASIC7.55□□□□□ -1.2
RB1P06400 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 AC102941.1-201ENST00000567616 1537 ntBASIC7.55□□□□□ -1.2
RB1P06400 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.55□□□□□ -1.2
RB1P06400 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.55□□□□□ -1.2
RB1P06400 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RB1P06400 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RB1P06400 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.54□□□□□ -1.2
RB1P06400 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 FANCD2P2-201ENST00000437591 1400 ntBASIC7.54□□□□□ -1.2
RB1P06400 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.54□□□□□ -1.2
RB1P06400 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms