Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-DOAP06340 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AL590240.2-201ENST00000413370 894 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC006509.1-201ENST00000420788 634 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC083855.1-201ENST00000440041 258 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC064862.5-201ENST00000440618 334 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 RN7SL390P-201ENST00000470634 284 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC007537.1-201ENST00000539347 327 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC091304.4-201ENST00000565703 620 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 ACTG1P15-201ENST00000570019 1063 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AL513548.2-201ENST00000602994 1207 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 RPS4XP21-201ENST00000603814 750 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AL133445.2-201ENST00000611191 527 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 MIR6849-201ENST00000618543 69 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC004943.1-203ENST00000624370 1074 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC017037.4-201ENST00000624526 826 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 AC005858.3-201ENST00000624756 589 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 CLUHP10-201ENST00000631979 980 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 OR8A1-204ENST00000642111 1145 ntBASIC8.28□□□□□ -1.08
HLA-DOAP06340 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
HLA-DOAP06340 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC8.28□□□□□ -1.08
HLA-DOAP06340 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
HLA-DOAP06340 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.08
HLA-DOAP06340 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
HLA-DOAP06340 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.27□□□□□ -1.08
HLA-DOAP06340 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 RNA5SP382-201ENST00000363355 112 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 AL353133.1-201ENST00000407695 401 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 Z82198.3-201ENST00000421145 199 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC000089.1-201ENST00000424559 801 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AHCYP8-201ENST00000425108 209 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 LSM3P3-201ENST00000436601 306 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 RN7SL870P-201ENST00000460111 296 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 RPS7P11-201ENST00000484240 586 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC092349.1-201ENST00000504903 310 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 MTCYBP44-201ENST00000514835 823 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC093878.1-201ENST00000515630 432 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 PPIAP6-201ENST00000557078 499 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms