Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.67□□□□□ -1.34
SCN2BO60939 MTND6P1-201ENST00000417434 424 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN2BO60939 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 CDK7P1-201ENST00000434574 693 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SCN2BO60939 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 GTF2F2P2-201ENST00000445825 721 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC016489.1-201ENST00000461109 375 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 RN7SL314P-201ENST00000490735 292 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN2BO60939 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.67□□□□□ -1.34
SCN2BO60939 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.67□□□□□ -1.34
SCN2BO60939 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.67□□□□□ -1.34
SCN2BO60939 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.67□□□□□ -1.34
SCN2BO60939 AC139493.1-201ENST00000604368 397 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 RN7SL778P-201ENST00000607160 297 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 AC079414.3-201ENST00000612986 1090 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC026333.4-201ENST00000613543 544 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 uc_338.37-201ENST00000620113 186 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC078909.2-201ENST00000620584 398 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC087072.2-201ENST00000621060 682 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC211433.3-201ENST00000623770 375 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN2BO60939 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN2BO60939 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 AC022819.1-201ENST00000563495 3910 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SCN2BO60939 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN2BO60939 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.67□□□□□ -1.34
SCN2BO60939 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SCN2BO60939 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SCN2BO60939 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN2BO60939 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN2BO60939 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN2BO60939 AC241584.2-201ENST00000637142 2090 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN2BO60939 AC090114.1-201ENST00000393266 448 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN2BO60939 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN2BO60939 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN2BO60939 DUTP4-201ENST00000424782 475 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 MYO5BP3-201ENST00000431872 1279 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN2BO60939 AC009237.4-201ENST00000441078 238 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN2BO60939 PABPC1P10-201ENST00000464731 381 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 RN7SL308P-201ENST00000464971 297 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 RN7SL228P-201ENST00000470060 303 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 RN7SL282P-201ENST00000479676 297 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN2BO60939 EEF1B2P2-201ENST00000519625 676 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AL591767.3-201ENST00000554632 525 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN2BO60939 BMS1P8-201ENST00000565049 1178 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 GTF2IP6-201ENST00000583143 541 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN2BO60939 AC111186.1-201ENST00000604684 130 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AC027271.1-201ENST00000610270 610 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 AC073488.7-201ENST00000633785 778 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.66□□□□□ -1.34
SCN2BO60939 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN2BO60939 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN2BO60939 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN2BO60939 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN2BO60939 AL589993.1-201ENST00000407450 2524 ntBASIC6.66□□□□□ -1.34
SCN2BO60939 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SCN2BO60939 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SCN2BO60939 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SCN2BO60939 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.65□□□□□ -1.34
SCN2BO60939 AC010168.2-201ENST00000562691 5428 ntBASIC6.65□□□□□ -1.34
SCN2BO60939 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN2BO60939 AC023632.6-201ENST00000624338 2177 ntBASIC6.65□□□□□ -1.34
SCN2BO60939 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN2BO60939 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN2BO60939 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN2BO60939 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN2BO60939 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN2BO60939 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms