Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC007938.1-201ENST00000562524 2902 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 RNA5SP378-201ENST00000363646 120 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 MIR301B-201ENST00000390813 78 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC109638.1-201ENST00000417406 326 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC114755.4-201ENST00000439114 443 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 RPL7P14-201ENST00000449851 741 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 RN7SL233P-201ENST00000469988 277 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC127024.1-201ENST00000490847 418 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC114300.1-201ENST00000502347 280 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 RN7SL178P-201ENST00000582930 304 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC129492.5-201ENST00000603489 315 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC239600.2-201ENST00000619615 1165 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 RN7SL680P-201ENST00000620379 299 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC012629.3-201ENST00000623397 328 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC114876.1-201ENST00000490962 1366 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 AC104581.5-201ENST00000624171 7141 ntBASIC6.69□□□□□ -1.34
SNX18Q96RF0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNX18Q96RF0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
SNX18Q96RF0 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 UG0898H09-202ENST00000623646 7040 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 MIR181C-201ENST00000384881 110 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 HNRNPCP2-201ENST00000399515 881 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 IFNA12P-201ENST00000413147 571 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 GAPDHP46-201ENST00000424043 994 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 SNX18P3-201ENST00000424993 835 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC114878.1-201ENST00000441166 358 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 LIN28AP2-201ENST00000445283 458 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 RN7SL213P-201ENST00000463482 317 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 RN7SL335P-201ENST00000482790 304 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 RN7SL124P-201ENST00000498656 285 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 OR7E87P-201ENST00000532397 929 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 HIGD1AP9-201ENST00000550710 279 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 BMS1P15-201ENST00000554269 1141 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms