Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.87□□□□□ -1.63
RPL39P62891 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RPL39P62891 AC133644.1-201ENST00000398171 937 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC113608.1-201ENST00000398740 305 ntBASIC4.87□□□□□ -1.63
RPL39P62891 RFKP1-201ENST00000400940 428 ntBASIC4.87□□□□□ -1.63
RPL39P62891 MED15P8-201ENST00000411601 545 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AL390840.1-201ENST00000420303 988 ntBASIC4.87□□□□□ -1.63
RPL39P62891 GAPDHP46-201ENST00000424043 994 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC073900.1-201ENST00000429766 776 ntBASIC4.87□□□□□ -1.63
RPL39P62891 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC4.87□□□□□ -1.63
RPL39P62891 AC079781.1-201ENST00000441505 394 ntBASIC4.87□□□□□ -1.63
RPL39P62891 HBG2-204ENST00000444587 307 ntTSL 2 BASIC4.87□□□□□ -1.63
RPL39P62891 SNORA81.1-201ENST00000458922 177 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC026254.1-201ENST00000479473 431 ntBASIC4.87□□□□□ -1.63
RPL39P62891 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC4.87□□□□□ -1.63
RPL39P62891 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC4.87□□□□□ -1.63
RPL39P62891 AC026700.1-201ENST00000512074 544 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC4.87□□□□□ -1.63
RPL39P62891 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC4.87□□□□□ -1.63
RPL39P62891 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC4.87□□□□□ -1.63
RPL39P62891 AC005479.1-201ENST00000554629 451 ntBASIC4.87□□□□□ -1.63
RPL39P62891 CYP4A26P-201ENST00000563017 196 ntBASIC4.87□□□□□ -1.63
RPL39P62891 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC4.87□□□□□ -1.63
RPL39P62891 HOTTIP_2.1-201ENST00000616633 376 ntBASIC4.87□□□□□ -1.63
RPL39P62891 BX005195.1-201ENST00000618097 1198 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC005790.1-201ENST00000619774 450 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AL353898.2-201ENST00000623000 255 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 AC011471.4-201ENST00000638271 216 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC025809.2-201ENST00000625085 1802 ntBASIC4.87□□□□□ -1.63
RPL39P62891 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RPL39P62891 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC4.87□□□□□ -1.63
RPL39P62891 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RPL39P62891 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC4.87□□□□□ -1.63
RPL39P62891 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPL39P62891 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 CA10-204ENST00000570565 2276 ntTSL 5 BASIC4.86□□□□□ -1.63
RPL39P62891 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 OR2M1P-201ENST00000318104 951 ntBASIC4.86□□□□□ -1.63
RPL39P62891 RNA5SP260-201ENST00000363849 111 ntBASIC4.86□□□□□ -1.63
RPL39P62891 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RPL39P62891 VN1R33P-201ENST00000411800 887 ntBASIC4.86□□□□□ -1.63
RPL39P62891 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 NPM1P30-201ENST00000425092 828 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC068137.1-201ENST00000429272 584 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AL606752.1-201ENST00000435442 666 ntBASIC4.86□□□□□ -1.63
RPL39P62891 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 RN7SL520P-201ENST00000474110 286 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 H3F3AP3-201ENST00000497682 407 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC4.86□□□□□ -1.63
RPL39P62891 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 OR4A13P-201ENST00000529316 942 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.86□□□□□ -1.63
RPL39P62891 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RPL39P62891 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AL355076.3-201ENST00000555838 587 ntBASIC4.86□□□□□ -1.63
RPL39P62891 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms