Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 RNA5SP79-201ENST00000365193 109 ntBASIC6.68□□□□□ -1.34
CD40P25942 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 SSX9-201ENST00000376909 591 ntBASIC6.68□□□□□ -1.34
CD40P25942 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 RNU6-207P-201ENST00000384137 107 ntBASIC6.68□□□□□ -1.34
CD40P25942 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CD40P25942 OLA1P1-201ENST00000396387 1189 ntBASIC6.68□□□□□ -1.34
CD40P25942 AL391422.1-201ENST00000402155 436 ntBASIC6.68□□□□□ -1.34
CD40P25942 RPL10P10-201ENST00000403509 664 ntBASIC6.68□□□□□ -1.34
CD40P25942 RN7SKP261-201ENST00000410948 278 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 MTATP6P20-201ENST00000414147 562 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC005005.2-201ENST00000420779 380 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 AC115285.1-201ENST00000424879 736 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC099344.1-201ENST00000433548 492 ntBASIC6.68□□□□□ -1.34
CD40P25942 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 RPS7P2-201ENST00000435134 607 ntBASIC6.68□□□□□ -1.34
CD40P25942 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 SNX18P9-201ENST00000440580 835 ntBASIC6.68□□□□□ -1.34
CD40P25942 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 RN7SL635P-201ENST00000492123 296 ntBASIC6.68□□□□□ -1.34
CD40P25942 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.68□□□□□ -1.34
CD40P25942 SUMO1P1-201ENST00000497904 306 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC084871.2-201ENST00000503355 464 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC106774.2-201ENST00000510266 406 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 AC100823.2-201ENST00000518337 699 ntBASIC6.68□□□□□ -1.34
CD40P25942 AP001207.2-201ENST00000519490 539 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.68□□□□□ -1.34
CD40P25942 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.68□□□□□ -1.34
CD40P25942 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 OOSP1P2-201ENST00000579644 351 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.68□□□□□ -1.34
CD40P25942 MIR4786-201ENST00000583954 80 ntBASIC6.68□□□□□ -1.34
CD40P25942 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.68□□□□□ -1.34
CD40P25942 AC005262.1-201ENST00000588562 362 ntBASIC6.68□□□□□ -1.34
CD40P25942 MRPS5P4-201ENST00000592830 325 ntBASIC6.68□□□□□ -1.34
CD40P25942 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 AC005393.1-201ENST00000617916 584 ntBASIC6.68□□□□□ -1.34
CD40P25942 SLC20A1P2-201ENST00000618036 966 ntBASIC6.68□□□□□ -1.34
CD40P25942 AC005609.2-201ENST00000623320 592 ntBASIC6.68□□□□□ -1.34
CD40P25942 AP000842.4-201ENST00000638781 748 ntBASIC6.68□□□□□ -1.34
CD40P25942 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.68□□□□□ -1.34
CD40P25942 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CD40P25942 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.68□□□□□ -1.34
CD40P25942 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.68□□□□□ -1.34
CD40P25942 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD40P25942 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
CD40P25942 AC127459.1-201ENST00000563129 2768 ntBASIC6.68□□□□□ -1.34
CD40P25942 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CD40P25942 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD40P25942 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.67□□□□□ -1.34
CD40P25942 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.67□□□□□ -1.34
CD40P25942 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms