Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 PPIAP22-201ENST00000358455 498 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.37□□□□□ -1.39
FREM3P0C091 UQCRHP1-204ENST00000424609 274 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 OR51P1P-201ENST00000447547 942 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 SETP17-201ENST00000534163 817 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC069240.2-201ENST00000550242 609 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 AC023513.1-201ENST00000604396 691 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 CASC19-212ENST00000641153 1287 ntBASIC6.37□□□□□ -1.39
FREM3P0C091 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
FREM3P0C091 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.37□□□□□ -1.39
FREM3P0C091 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
FREM3P0C091 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FREM3P0C091 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FREM3P0C091 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FREM3P0C091 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.36□□□□□ -1.39
FREM3P0C091 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 CTAGE11P-201ENST00000451540 2353 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 AC009220.2-201ENST00000489759 1751 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 RNA5SP308-201ENST00000362532 115 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 RN7SKP55-201ENST00000364888 307 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 MIR152-201ENST00000385212 87 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 AL161742.1-201ENST00000418154 584 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 CHCHD3P1-201ENST00000425516 676 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 BX005266.3-201ENST00000443013 1075 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.36□□□□□ -1.39
FREM3P0C091 RPSAP7-201ENST00000456871 885 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 AL591122.1-201ENST00000487348 492 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 PABPC1P1-201ENST00000506347 591 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 AC093325.1-201ENST00000508378 326 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.36□□□□□ -1.39
FREM3P0C091 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.36□□□□□ -1.39
FREM3P0C091 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.36□□□□□ -1.39
FREM3P0C091 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.36□□□□□ -1.39
FREM3P0C091 PRR13P5-201ENST00000596581 442 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.36□□□□□ -1.39
FREM3P0C091 AC025287.2-201ENST00000621911 668 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.36□□□□□ -1.39
FREM3P0C091 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
FREM3P0C091 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
FREM3P0C091 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
FREM3P0C091 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 AC127070.3-201ENST00000503695 3263 ntBASIC6.36□□□□□ -1.39
FREM3P0C091 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FREM3P0C091 RNU12-2P-201ENST00000364789 156 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 RPL12P23-201ENST00000405880 490 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 RN7SKP148-201ENST00000410179 275 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AL590128.1-201ENST00000433407 286 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.35□□□□□ -1.39
FREM3P0C091 SRP68P2-201ENST00000456184 254 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 RN7SL379P-201ENST00000479912 293 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AL079303.1-201ENST00000486611 463 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.35□□□□□ -1.39
FREM3P0C091 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.35□□□□□ -1.39
FREM3P0C091 MTCYBP44-201ENST00000514835 823 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.35□□□□□ -1.39
FREM3P0C091 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 RN7SL32P-201ENST00000580514 281 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.35□□□□□ -1.39
FREM3P0C091 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.35□□□□□ -1.39
FREM3P0C091 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FREM3P0C091 AC102941.1-201ENST00000567616 1537 ntBASIC6.35□□□□□ -1.39
FREM3P0C091 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.35□□□□□ -1.39
FREM3P0C091 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms