Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
P04436 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.47□□□□□ -1.37
P04436 AC114402.2-201ENST00000432760 643 ntBASIC6.47□□□□□ -1.37
P04436 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.47□□□□□ -1.37
P04436 GAPDHP53-201ENST00000458397 924 ntBASIC6.47□□□□□ -1.37
P04436 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.47□□□□□ -1.37
P04436 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.47□□□□□ -1.37
P04436 AC008868.1-201ENST00000509786 737 ntBASIC6.47□□□□□ -1.37
P04436 IGLC4-201ENST00000517690 248 ntBASIC6.47□□□□□ -1.37
P04436 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.47□□□□□ -1.37
P04436 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.47□□□□□ -1.37
P04436 PTTG3P-201ENST00000521862 606 ntBASIC6.47□□□□□ -1.37
P04436 AC021820.1-201ENST00000525564 808 ntBASIC6.47□□□□□ -1.37
P04436 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.47□□□□□ -1.37
P04436 SSU72P6-201ENST00000532644 488 ntBASIC6.47□□□□□ -1.37
P04436 AC013283.1-201ENST00000557282 492 ntBASIC6.47□□□□□ -1.37
P04436 AC093283.1-201ENST00000565306 1075 ntBASIC6.47□□□□□ -1.37
P04436 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.47□□□□□ -1.37
P04436 AC096708.2-201ENST00000577676 512 ntBASIC6.47□□□□□ -1.37
P04436 WDR45BP1-201ENST00000583470 1029 ntBASIC6.47□□□□□ -1.37
P04436 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.47□□□□□ -1.37
P04436 AC063962.1-201ENST00000608199 521 ntBASIC6.47□□□□□ -1.37
P04436 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.47□□□□□ -1.37
P04436 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 RN7SL126P-201ENST00000616400 299 ntBASIC6.47□□□□□ -1.37
P04436 AC127071.1-201ENST00000624997 712 ntBASIC6.47□□□□□ -1.37
P04436 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P04436 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.47□□□□□ -1.37
P04436 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
P04436 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
P04436 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
P04436 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.47□□□□□ -1.37
P04436 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.47□□□□□ -1.37
P04436 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P04436 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
P04436 AL512353.3-201ENST00000417517 1326 ntBASIC6.47□□□□□ -1.37
P04436 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.47□□□□□ -1.37
P04436 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.47□□□□□ -1.37
P04436 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
P04436 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.37
P04436 AL353898.3-201ENST00000624679 1755 ntBASIC6.46□□□□□ -1.37
P04436 OR2A3P-202ENST00000641249 1776 ntBASIC6.46□□□□□ -1.37
P04436 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.46□□□□□ -1.37
P04436 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P04436 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.46□□□□□ -1.37
P04436 AL358913.2-201ENST00000553881 1548 ntBASIC6.46□□□□□ -1.37
P04436 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P04436 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
P04436 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
P04436 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
P04436 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.46□□□□□ -1.38
P04436 RN7SKP107-201ENST00000364157 290 ntBASIC6.46□□□□□ -1.38
P04436 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.46□□□□□ -1.38
P04436 AC006511.2-201ENST00000388966 660 ntBASIC6.46□□□□□ -1.38
P04436 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.46□□□□□ -1.38
P04436 AC091492.1-201ENST00000419844 272 ntBASIC6.46□□□□□ -1.38
P04436 CHCHD4P5-201ENST00000436684 427 ntBASIC6.46□□□□□ -1.38
P04436 AC027124.1-201ENST00000440852 466 ntBASIC6.46□□□□□ -1.38
P04436 AL359263.1-201ENST00000441188 2796 ntBASIC6.46□□□□□ -1.38
P04436 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 BX005266.3-201ENST00000443013 1075 ntBASIC6.46□□□□□ -1.38
P04436 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.46□□□□□ -1.38
P04436 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.46□□□□□ -1.38
P04436 AC122714.1-201ENST00000502510 459 ntBASIC6.46□□□□□ -1.38
P04436 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.46□□□□□ -1.38
P04436 AC089984.3-201ENST00000552838 363 ntBASIC6.46□□□□□ -1.38
P04436 AL135978.1-201ENST00000553618 1266 ntBASIC6.46□□□□□ -1.38
P04436 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.46□□□□□ -1.38
P04436 AC022001.1-201ENST00000605193 268 ntBASIC6.46□□□□□ -1.38
P04436 MIR6070-201ENST00000613967 103 ntBASIC6.46□□□□□ -1.38
P04436 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.46□□□□□ -1.38
P04436 AC091059.2-201ENST00000623355 614 ntBASIC6.46□□□□□ -1.38
P04436 AC027348.2-201ENST00000624375 642 ntBASIC6.46□□□□□ -1.38
P04436 AC008626.2-201ENST00000624425 248 ntBASIC6.46□□□□□ -1.38
P04436 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.46□□□□□ -1.38
P04436 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 AC126474.2-201ENST00000623268 1750 ntBASIC6.46□□□□□ -1.38
P04436 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
P04436 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
P04436 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.46□□□□□ -1.38
P04436 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
P04436 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms