Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 OR7E85P-201ENST00000512164 985 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 OR10J2P-201ENST00000514684 961 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 MTCYBP19-201ENST00000517463 1124 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC044836.1-201ENST00000519514 274 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL352979.1-201ENST00000554238 297 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC012186.1-201ENST00000566702 398 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 OR4C45-201ENST00000568934 921 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RPL17-212ENST00000581373 584 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC005242.1-201ENST00000585658 438 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 VN1R82P-201ENST00000601481 356 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AP000942.4-201ENST00000604811 241 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC022001.1-201ENST00000605193 268 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AP003392.5-201ENST00000607857 415 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AL138478.1-201ENST00000612252 832 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 FRG2MP-201ENST00000613317 856 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC022079.2-201ENST00000619739 566 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC027176.3-201ENST00000624460 586 ntBASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUEDC1Q9NWM3 AC120114.2-201ENST00000567795 2272 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 DEFB108C-201ENST00000400154 252 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 PHBP7-201ENST00000415677 814 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 OR6K4P-201ENST00000423179 955 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 B3GNT2P1-201ENST00000434960 952 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 Z97634.1-203ENST00000435229 471 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC112653.1-201ENST00000443851 386 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 FAR2P3-205ENST00000447059 604 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC093392.2-201ENST00000450682 337 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 SNX18P4-201ENST00000456554 838 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC018638.4-201ENST00000465971 1150 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 RPL30P6-201ENST00000475925 342 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 RPL23AP66-201ENST00000494341 479 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC108941.1-201ENST00000502853 530 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 DSTNP2-201ENST00000504533 515 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 NDUFA5P2-201ENST00000519723 344 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 HIGD1AP10-201ENST00000527837 282 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 OR8L1P-201ENST00000534005 955 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC174071.1-201ENST00000603069 517 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 RN7SL760P-201ENST00000607344 270 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AL451074.6-201ENST00000608512 729 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 GZMB-209ENST00000616551 559 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms