Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.38□□□□□ -1.23
SLC1A1P43005 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.38□□□□□ -1.23
SLC1A1P43005 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.37□□□□□ -1.23
SLC1A1P43005 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.37□□□□□ -1.23
SLC1A1P43005 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AC093107.1-201ENST00000422772 609 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SLC1A1P43005 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AC096743.1-201ENST00000485172 319 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.37□□□□□ -1.23
SLC1A1P43005 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.37□□□□□ -1.23
SLC1A1P43005 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 SCARNA6-201ENST00000515982 265 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AL591767.3-201ENST00000554632 525 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SLC1A1P43005 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.37□□□□□ -1.23
SLC1A1P43005 MRPS21P9-201ENST00000571150 257 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 MIR4262-201ENST00000578394 54 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AC113361.1-201ENST00000606683 543 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 AC087269.2-201ENST00000641764 975 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.37□□□□□ -1.23
SLC1A1P43005 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.37□□□□□ -1.23
SLC1A1P43005 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SLC1A1P43005 LINC01808-203ENST00000641932 1643 ntBASIC7.37□□□□□ -1.23
SLC1A1P43005 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SLC1A1P43005 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.36□□□□□ -1.23
SLC1A1P43005 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 MAPK10-344ENST00000641718 3746 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SLC1A1P43005 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.36□□□□□ -1.23
SLC1A1P43005 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 SSR1P1-201ENST00000407630 814 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 GYG1P2-201ENST00000426437 1006 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 RN7SL815P-201ENST00000470970 290 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 RPL23AP8-201ENST00000479812 475 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 AC079594.1-201ENST00000489757 331 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 GLYATL1P4-201ENST00000529326 906 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 AC079866.1-201ENST00000534985 1220 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.36□□□□□ -1.23
SLC1A1P43005 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.36□□□□□ -1.23
SLC1A1P43005 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.36□□□□□ -1.23
SLC1A1P43005 AC087072.2-201ENST00000621060 682 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 AC131009.3-201ENST00000621809 287 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 KDM5DP1-201ENST00000622542 298 ntBASIC7.36□□□□□ -1.23
SLC1A1P43005 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SLC1A1P43005 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.36□□□□□ -1.23
SLC1A1P43005 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SLC1A1P43005 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.35□□□□□ -1.23
SLC1A1P43005 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms