Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.57□□□□□ -1.2
MTHFRP42898 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
MTHFRP42898 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.57□□□□□ -1.2
MTHFRP42898 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.57□□□□□ -1.2
MTHFRP42898 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
MTHFRP42898 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 AL355974.1-201ENST00000618896 1708 ntBASIC7.57□□□□□ -1.2
MTHFRP42898 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
MTHFRP42898 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MTHFRP42898 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MTHFRP42898 AP003471.1-202ENST00000319051 1988 ntBASIC7.57□□□□□ -1.2
MTHFRP42898 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
MTHFRP42898 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
MTHFRP42898 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
MTHFRP42898 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
MTHFRP42898 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 CXADRP1-201ENST00000398098 1095 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 VN1R12P-201ENST00000403778 876 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 RN7SKP38-201ENST00000410782 309 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 RN7SKP85-201ENST00000411349 318 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.56□□□□□ -1.2
MTHFRP42898 RPLP1P10-201ENST00000413972 339 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 PTPN2P1-201ENST00000423212 1072 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.56□□□□□ -1.2
MTHFRP42898 Z83313.1-201ENST00000433780 718 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.56□□□□□ -1.2
MTHFRP42898 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.56□□□□□ -1.2
MTHFRP42898 GAPDHP53-201ENST00000458397 924 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.56□□□□□ -1.2
MTHFRP42898 RPS14P7-201ENST00000473701 448 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.56□□□□□ -1.2
MTHFRP42898 GCSHP1-201ENST00000512554 484 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 LDHBP3-201ENST00000514909 822 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 RN7SKP233-201ENST00000517005 110 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.56□□□□□ -1.2
MTHFRP42898 OR5M6P-201ENST00000530227 937 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.56□□□□□ -1.2
MTHFRP42898 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 MIR4310-201ENST00000582950 57 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.56□□□□□ -1.2
MTHFRP42898 MIR7109-201ENST00000613748 65 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 CXADRP3-202ENST00000617265 1100 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 AP002364.1-201ENST00000623330 3386 ntBASIC7.56□□□□□ -1.2
MTHFRP42898 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MTHFRP42898 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
MTHFRP42898 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.56□□□□□ -1.2
MTHFRP42898 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
MTHFRP42898 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
MTHFRP42898 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
MTHFRP42898 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
MTHFRP42898 RN7SKP91-201ENST00000410852 288 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 RPSAP60-201ENST00000415403 880 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC7.55□□□□□ -1.2
MTHFRP42898 GAPDHP19-201ENST00000431768 1005 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.55□□□□□ -1.2
MTHFRP42898 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.55□□□□□ -1.2
MTHFRP42898 AC099670.1-201ENST00000455141 783 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.55□□□□□ -1.2
MTHFRP42898 RN7SL492P-201ENST00000460700 295 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AC084851.2-201ENST00000530377 364 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 OR5BK1P-201ENST00000550421 823 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.55□□□□□ -1.2
MTHFRP42898 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.55□□□□□ -1.2
MTHFRP42898 MIR4271-201ENST00000582451 67 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AC011500.1-201ENST00000601963 469 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 SNX29P2-204ENST00000603801 875 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 AC016405.2-201ENST00000607393 312 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC7.55□□□□□ -1.2
MTHFRP42898 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.55□□□□□ -1.2
MTHFRP42898 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
MTHFRP42898 AC090181.3-201ENST00000624777 1514 ntBASIC7.55□□□□□ -1.2
MTHFRP42898 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.55□□□□□ -1.2
MTHFRP42898 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
MTHFRP42898 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
MTHFRP42898 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.55□□□□□ -1.2
MTHFRP42898 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms