Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.9□□□□□ -0.98
COL15A1P39059 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.9□□□□□ -0.98
COL15A1P39059 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.9□□□□□ -0.98
COL15A1P39059 MIR6806-201ENST00000622141 64 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 AL049541.2-201ENST00000626377 555 ntBASIC8.9□□□□□ -0.98
COL15A1P39059 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.9□□□□□ -0.98
COL15A1P39059 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
COL15A1P39059 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.9□□□□□ -0.98
COL15A1P39059 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
COL15A1P39059 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.9□□□□□ -0.98
COL15A1P39059 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
COL15A1P39059 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
COL15A1P39059 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.9□□□□□ -0.99
COL15A1P39059 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC8.9□□□□□ -0.99
COL15A1P39059 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
COL15A1P39059 NF1P8-201ENST00000415351 1461 ntBASIC8.9□□□□□ -0.99
COL15A1P39059 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
COL15A1P39059 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
COL15A1P39059 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
COL15A1P39059 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
COL15A1P39059 AP002800.1-201ENST00000624982 2225 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.89□□□□□ -0.99
COL15A1P39059 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.89□□□□□ -0.99
COL15A1P39059 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.89□□□□□ -0.99
COL15A1P39059 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 RPSAP32-201ENST00000432681 526 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
COL15A1P39059 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC8.89□□□□□ -0.99
COL15A1P39059 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.89□□□□□ -0.99
COL15A1P39059 AC121758.1-202ENST00000556917 658 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.89□□□□□ -0.99
COL15A1P39059 MT1CP-201ENST00000567054 174 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AC010327.2-201ENST00000587647 488 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 DIMT1P1-201ENST00000603970 763 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AC127071.2-201ENST00000623293 527 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AC004943.1-203ENST00000624370 1074 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 RPSAP68-201ENST00000625020 438 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AC027559.1-201ENST00000636288 271 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 AC079949.2-201ENST00000617117 2933 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 AC090771.1-201ENST00000585803 1618 ntBASIC8.89□□□□□ -0.99
COL15A1P39059 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
COL15A1P39059 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
COL15A1P39059 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
COL15A1P39059 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 RNA5SP85-201ENST00000365378 119 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 AC006511.2-201ENST00000388966 660 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.88□□□□□ -0.99
COL15A1P39059 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
COL15A1P39059 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.88□□□□□ -0.99
COL15A1P39059 AC099340.1-201ENST00000475247 599 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 AC106822.1-201ENST00000502647 526 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 AC055733.3-201ENST00000505214 523 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.88□□□□□ -0.99
COL15A1P39059 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 MIR4732-201ENST00000581873 76 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 AC005828.7-201ENST00000607331 556 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 AP005329.3-201ENST00000609924 686 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.88□□□□□ -0.99
COL15A1P39059 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 AL035555.1-201ENST00000404462 1790 ntBASIC8.88□□□□□ -0.99
COL15A1P39059 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.88□□□□□ -0.99
COL15A1P39059 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
COL15A1P39059 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms